Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	3218610	15360721	6576	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	15362356	15362544	2	-1.7085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	1	15366240	247813706	122403	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	2	484222	242476062	131143	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	2212571	36448067	20371	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	36451990	36452364	2	-1.4301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	36453239	103912041	35755	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	103913431	103914757	2	-1.7035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	3	103914827	197538677	50119	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	4	1053934	188763651	102615	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	914233	144433331	77997	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	144442198	144442326	2	-1.3622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	144443517	169639107	16620	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	169639751	169639901	3	-1.3755
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	5	169640260	180360469	5773	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	6	1014281	170903919	96377	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	705284	16803990	8194	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	16806301	16808472	2	-1.526
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	7	16811553	158385118	73039	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	617667	15774295	7569	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	15789762	15874907	92	-1.1267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	16024384	81009088	36281	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	81013950	81018284	5	-1.0328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	8	81022870	145232496	37506	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	9	789932	140938752	67964	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	415240	5509387	3259	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	5509681	5519005	5	-0.7776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	5526158	9429516	3059	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	9429819	9578574	81	-0.9686
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	10	9769282	135225087	74362	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	11	456120	134142530	77165	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	889902	32316619	18768	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	32320830	32320912	2	-1.3108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	32323836	33208214	617	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	33216078	33216299	2	-1.1109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	33217072	41997375	1873	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	41997650	41997687	2	-1.215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	41998201	54987545	6699	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	54990463	54995872	7	-0.8432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	12	54997372	133161346	45880	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	19450806	113034813	55911	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	113035391	113040531	2	-1.4094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	13	113045517	114987458	636	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	14	20501368	105988038	49384	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	23687685	46436733	11060	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	46439311	46453004	7	-0.8114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	46460013	86291269	23628	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	86292471	86293097	2	-1.466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	15	86293643	101884307	9780	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	16	653459	89379936	40772	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	17	987221	80917016	36956	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	18	329586	77109240	42599	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	284018	5633238	1373	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	5633878	5635801	2	-1.1473
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	19	5636364	58878226	22562	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	20	455764	62219837	37254	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	21	15347621	47678774	20562	-0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	22	17423930	49331012	16913	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E11_801958	X	3157107	154905589	63749	2e-04
