Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	3208470	20993680	9880	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	20996319	21018247	15	-0.5679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	21019239	228518035	107768	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	228518946	228519075	2	1.3458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	228520220	232026028	2535	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	232029793	232030641	2	1.3114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	232032946	245880329	8759	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	474222	47254462	28097	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	47265290	47272577	7	-1.1257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	47274613	232721399	97404	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	232731253	232742739	8	-0.8424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	232756376	233748193	482	-0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	233754835	233756768	2	-3.1984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	233760975	242124735	5191	-0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	3	526235	199023074	106295	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	1043934	156987678	85808	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	156988396	163380532	3680	-0.7747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	163380926	163385702	3	-2.7369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	163385727	169317634	3006	-0.7736
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	169320042	169324223	5	-4.2619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	169325480	189836143	10081	-0.7914
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	967233	28592222	16351	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	28596734	28671582	41	0.5947
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	28766217	153019508	67290	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	153023210	180293075	16727	0.4845
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	959281	121189503	66553	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	121192578	121193971	5	-1.0959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	121196508	132620568	6837	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	132620990	132621311	2	-1.2715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	132626017	132718470	61	0.0634
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	132718658	132722704	3	-1.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	132723570	150702769	11181	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	150706407	150706560	2	-1.2696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	150706971	165367932	9393	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	165368565	167414387	1498	0.4987
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	167421512	167421528	2	-1.1038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	167421849	170745844	848	0.4791
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	7	671810	158077879	81258	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	607667	140570735	80113	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	140572721	140572863	2	-1.8387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	140573519	145304484	1359	-0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	779932	103594577	45649	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	103594814	103594998	2	-1.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	103595019	129589450	17310	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	129591532	135436715	3303	0.4629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	135436785	135436842	3	-0.4098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	135436860	140058573	1701	0.4589
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	10	405240	135075077	80795	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	446120	13490926	7996	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	13492970	13504193	7	-0.9638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	13504561	133647740	69194	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	760163	4301116	1885	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	4302337	4303900	2	-1.4888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	4306938	41131163	19855	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	41133077	41137705	4	-1.0508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	41141486	56387598	7823	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	56391149	56391374	2	-1.4045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	56393103	131671419	44308	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	13	18348806	114005560	56587	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	14	19571208	105059083	49397	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	15	21238778	99701830	44481	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	593460	1101811	95	-0.0496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	1119032	2840437	473	0.4435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	2850787	2919131	31	-0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	2929842	3095007	56	0.4401
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	3099950	69403572	28155	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	69408394	69757550	63	0.5152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	69762695	87907437	11970	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	17	933971	21245985	9597	-0.7762
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	17	22294644	78510305	27327	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	18	319586	75210228	42618	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	235018	40527729	14250	0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	40528438	40528675	2	-1.4712
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	40529290	63570038	9694	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	403764	46805595	27439	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	46808998	46809592	2	-1.3441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	46815041	55113830	5589	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	55114535	55114550	2	-1.2734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	55114731	61690281	4226	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	21	14269492	46503202	20567	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	22	15803930	47717016	16922	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	X	3167107	145216570	59887	-0.0288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	X	145219396	154558783	3847	0.4522
