Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	3218610	21121093	9879	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	21123732	21145660	15	-0.5679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	21146652	230451412	107825	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	230452323	230452452	2	1.3458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	230453597	233959405	2534	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	233963170	233964018	2	1.3114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	1	233966323	247813706	8758	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	484222	47400958	28093	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	47411786	47419073	7	-1.1257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	47421109	233013155	97399	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	233023009	233034495	8	-0.8424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	233048132	234084130	482	-0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	234090096	234092029	2	-3.1984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	2	234096236	242476062	5192	-0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	3	2212571	197538677	106289	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	1053934	156768228	85813	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	156768946	163161082	3680	-0.7747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	163161476	163166252	3	-2.7369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	163166277	169081059	3007	-0.7733
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	169083467	169087648	5	-4.2619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	4	169088905	188763651	10080	-0.7914
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	914233	28556465	16353	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	28560977	28635825	41	0.5947
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	28730460	153039315	67288	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	5	153043017	180360469	16727	0.4844
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	1014281	121147804	66559	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	121150879	121152272	5	-1.0959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	121154809	165447942	27482	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	165448575	167494397	1498	0.4987
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	167501522	167501538	2	-1.1038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	6	167501859	170903919	848	0.4791
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	7	705284	158385118	81259	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	617667	140501553	80120	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	140503539	140503681	2	-1.8387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	8	140504337	145232496	1359	-0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	789932	104554756	45657	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	104554993	104555177	2	-1.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	104555198	130549629	17314	0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	9	130551711	140938752	5007	0.461
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	10	415240	135225087	80793	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	456120	13534350	7995	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	13536394	13547617	7	-0.9638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	11	13547985	134142530	69185	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	889902	4430855	1885	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	4432076	4433639	2	-1.4888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	4436677	42844896	19851	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	42846810	42851438	4	-1.0508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	42855219	58101331	7823	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	58104882	58105107	2	-1.4045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	12	58106836	133161346	44307	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	13	19450806	114987458	56583	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	14	20501368	105988038	49395	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	15	23687685	101884307	44479	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	653459	1161810	95	-0.0496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	1179031	2900436	473	0.4435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	2910786	2979130	31	-0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	2989841	3155006	56	0.4401
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	16	3159949	89379936	40124	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	17	987221	21305392	9597	-0.7762
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	17	25270517	80917016	27327	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	18	329586	77109240	42615	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	284018	35835889	14250	0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	35836598	35836835	2	-1.4712
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	19	35837450	58878226	9694	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	455764	47372188	27442	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	47375591	47376185	2	-1.3441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	47381634	55680423	5589	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	55681128	55681143	2	-1.2734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	20	55681324	62219837	4226	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	21	15347621	47678774	20566	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	22	17423930	49331012	16921	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	X	3157107	145408878	59906	-0.0288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_E12_801980	X	145411704	154905589	3845	0.4523
