Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	61735	25593128	14162	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	25595881	25662005	29	0.5737
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	25662212	35091594	4968	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	35091638	35114268	23	-0.4843
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	35115542	39132431	2197	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	39132432	39132462	3	1.2861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	39135188	41021036	988	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	41022076	41028210	3	-5.6836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	41028926	62114006	13283	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	62114951	62118187	2	-2.9829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	62119809	71060331	6312	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	71065311	71067053	3	-1.2647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	71067139	72768916	1063	0.0248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	72768936	72809372	39	1.0993
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	72809431	104159384	20079	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	104163499	104303403	28	0.452
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	104303501	106019205	920	-0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	106019236	106022344	14	0.75
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	106022360	108729759	1944	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	108734235	108734877	2	-3.5389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	108737496	108766355	19	-0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	108769302	108817179	2	-3.0612
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	108828957	108910745	53	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	108928460	108986197	11	-0.8239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	109013908	110227515	640	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	110232974	110240178	17	1.0595
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	110242953	112690326	1957	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	112695965	112697213	22	0.5772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	112697241	148911177	6366	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	148916060	149521846	175	-0.6288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	149545372	149617451	6	0.7877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	149617488	149677141	8	0.0991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	149691264	149732625	13	-0.5193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	149732729	152555527	1466	0.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	152555706	152586576	34	0.6701
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	152586594	152762046	177	0.0305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	152762257	152768700	32	0.4046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	152773905	158866573	3621	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	158868501	158869759	2	3.1984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	158874818	169216937	7710	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	169233974	169241766	7	-1.9659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	169242401	248737447	54044	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	248749194	248795289	30	-0.6837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	248795852	249224388	148	0.1277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	12784	4213864	2988	0.026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	4214200	4222539	32	-0.5418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	4222649	34691069	21083	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	34699315	34737163	47	-0.4156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	34737556	52754881	13047	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	52758753	52781542	33	0.75
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	52787949	146862085	53622	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	146864404	146866934	24	-1.7736
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	146877806	233237526	52885	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	233237627	233242256	16	0.5431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	233242343	243089456	6234	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	60345	1256380	1001	0.0346
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	1256760	1256766	2	-3.8594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	1256852	6646543	4840	0.0229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6651128	6653332	23	-0.5728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6655078	68746164	41979	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	68746259	68747413	14	-1.3468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	68748758	72637774	2980	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72639229	72639332	2	-2.159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72641416	84699758	6954	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	84699793	84702600	18	-0.5486
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	84706284	98937784	5988	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	98944458	98949421	38	-0.5681
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	98950964	128380252	18100	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	128381249	128412331	16	0.6133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	128414161	140542539	7415	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	140545701	140546984	2	-2.6314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	140560618	148962947	5172	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	148962963	148966743	25	-0.6352
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	148966913	156676584	4756	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	156678467	156683552	6	-0.9617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	156691408	162714517	3723	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	162717727	162719562	2	-3.2568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	162726159	195285898	20621	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	195383142	195456048	36	-0.6274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	195456889	197896118	1185	0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	12281	74508	67	-0.3145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	74983	4166518	1650	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	4166983	4166997	2	-1.6758
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	4167133	9456977	3531	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	9461230	9464972	3	1.5418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	9470734	10210390	550	0.0404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	10223416	10235268	35	0.616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	10236142	10392354	171	0.0264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	10393154	10400668	15	-0.7059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	10402718	34779054	16794	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	34786500	34824725	38	0.4739
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	34829872	115173700	47295	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	115175323	115182175	23	-1.119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	115184229	122281973	4349	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	122282468	122285135	28	-0.6027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	122291131	172369346	30344	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	172374884	172377724	11	2.7713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	172377776	191027923	12528	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	15532	46271930	30800	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	46272521	46273502	5	-2.2347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	46278212	73302623	14118	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73303022	73307983	2	-2.7366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73309362	175460087	65415	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	175465689	175469507	2	-2.5693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	175470324	177198449	729	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	177227551	177232605	3	2.7314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	177254965	180374523	1813	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	180378710	180418103	19	-1.8979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	180433225	180790320	171	0.0412
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	149661	267693	109	-0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	271773	294837	15	-0.7619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	302306	32431292	22815	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	32431552	32619613	66	0.7394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	32622194	32686196	44	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	32688615	32690830	11	0.7683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	32692227	81284638	28544	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	81284716	81294341	30	-0.8807
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	81294399	103734829	14013	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	103737976	103765470	47	0.5843
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	103765670	171051005	44233	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	43355	38319339	27436	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	38319378	38344487	65	0.3361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	38348812	54380373	11058	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	54386505	54386517	6	-1.2655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	54393488	97385970	22157	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	97395460	97404277	18	-0.7023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	97404328	109437101	6639	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	109437669	109441212	16	-0.7176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	109441244	109453910	11	-1.8574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	109453982	126045556	10031	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	126045651	126046876	11	1.869
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	126046877	159127004	21038	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	31254	1362803	889	0.0365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	1362846	1362862	2	-2.1552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	1363214	1367068	11	0.193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	1367362	1368016	6	-1.0989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	1369636	14509568	12461	0.0215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	14510032	14510074	3	-1.803
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	14510396	14741390	241	-0.0099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	14743201	14749746	4	-1.0828
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	14750471	40182117	17925	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	40183797	40194429	36	-0.7085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	40194456	51030772	3970	0.0177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	51032011	51033423	9	-1.5187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	51038578	112294646	37452	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	112294670	112295260	6	-2.2934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	112300281	146298155	22932	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	9	46587	138214105	78796	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	9	138215622	138216412	2	-3.196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	9	138217797	141091394	1115	0.0291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	72759	17894976	14881	0.0131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	17927554	18136748	13	0.8106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	18150761	67307936	29841	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	67307951	67322926	28	-0.6147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	67325453	135506704	46302	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	198510	5783682	3301	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	5783923	5808376	32	-0.7263
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	5809048	55363340	31321	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	55374032	55444211	49	0.3849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	55444868	89759430	19961	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	89776846	89810338	5	-1.617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	89818310	134944770	32458	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	150442	9630556	6205	0.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	9633870	9651391	6	0.564
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	9652050	9713674	16	1.2453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	9714954	9734970	5	0.6948
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	9735686	11220724	1040	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	11220827	11256829	13	-1.3374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	11260275	11504091	130	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	11511577	11553368	39	-0.6781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	11553878	33294660	15407	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	33301406	33303610	18	-0.8284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	33303654	43419957	4172	0.0254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	43420529	43420753	2	-1.9315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	43427308	99795737	35211	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	99795773	99798355	23	-0.6581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	99798526	130000586	20384	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	130003490	130003594	2	-1.7831
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	130003770	133778189	2376	0.0513
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	19026949	20097944	547	-0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	20100527	20100787	2	2.1509
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	20101517	49531551	21062	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	49533715	49536504	2	-2.8296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	49537705	72476988	13530	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	72477555	72480556	4	-2.5083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	72480605	92101029	12667	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	92101206	92107856	2	-1.6992
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	92108267	98527274	4287	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	98530124	98533830	7	-0.995
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	98538299	115108397	12172	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	19002124	19557041	40	-0.0617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	19562139	20424926	150	-0.4158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	20425509	40608928	12912	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	40613922	40616919	2	-1.9766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	40618165	74001123	21204	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	74006707	74029900	9	-1.5382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	74029915	98140347	16199	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	98146801	98146805	2	-2.1641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	98146905	106872062	4760	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	106874361	106918094	51	-0.5009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	106918108	107285437	225	-0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	15	20016328	30519742	5125	0.0298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	15	30523088	30589797	22	-0.5805
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	15	30590054	102469040	46892	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	60777	22557932	14854	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	22558311	22704520	70	-0.4857
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	22710742	32092763	5160	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	32092834	32588622	78	-0.3424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	32588901	32588906	4	-4.5428
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	32588909	33859076	203	-0.2756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	33862863	53458017	4929	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	53469387	53469807	3	1.5186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	53469929	55796594	2026	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	55798222	55798779	3	3.6434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	55804348	90287535	25106	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	526	16738160	10519	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	16740270	16741528	3	-1.7042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	16741784	44505241	13116	0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	44523711	44523726	2	1.9745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	44546329	81049726	21649	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	11543	38260480	22834	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	38260490	38265389	14	-0.9018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	38268024	63767140	17562	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	63767288	63767922	2	-2.4899
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	63775595	78015057	10381	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	90910	5831107	1735	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	5833037	5866073	18	-0.8601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	5870281	21814919	7927	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	21815640	21819869	2	2.0651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	21820111	36563749	7507	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	36564758	36568094	2	-1.6222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	36568798	43263506	3375	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	43264350	43362652	38	0.4667
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	43368935	59097854	8749	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	61305	1560999	1207	0.0294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	1561580	1593893	41	-1.0388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	1597946	26305579	18816	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	29420352	29609280	51	-0.4056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	29612307	62956153	22383	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	21	10736871	20056087	3709	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	21	20057678	20078424	24	0.4431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	21	20078500	48096957	20665	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	16052528	21840595	2892	0.0392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	21840674	21840690	2	-2.0947
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	21840765	24344422	1728	0.0404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	24350529	24396814	19	-1.5296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	24401529	51234455	18918	0.0099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	168477	8246179	4298	-0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	8252375	8394253	140	0.8785
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	8401401	20750938	8011	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20756740	20757892	2	-2.789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20758067	24517978	2516	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24518283	24518585	2	-4.7688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24518685	47666629	14002	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	47667557	47667640	2	-2.4721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	47667675	48154414	283	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	48154744	48166304	6	-2.1332
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	48168737	123595646	36586	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123596006	123596019	2	-3.7856
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123597537	155182354	18587	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	Y	2650438	22262565	6838	-0.9219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	Y	22266589	22514968	9	-1.9185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	Y	22515706	59018259	1787	-0.9268
