Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	3208470	245880329	128974	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	474222	242124735	131213	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	526235	6881622	2210	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6882006	6886400	5	-1.0772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6887613	72720464	39597	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72721919	72722022	2	-2.159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72724106	199023074	64496	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	1043934	189836143	102642	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	967233	73338379	38704	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73338778	73343739	2	-2.7366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73345118	180293075	61709	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	959281	170745844	96397	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	671810	158077879	81266	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	607667	145304484	81480	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	9	779932	140058573	67979	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	405240	7586141	4815	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	7586350	7587206	2	-1.5607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	7589855	32115627	17231	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	32121373	32122664	3	-1.4082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	32123623	54049392	8857	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	54049457	54049644	2	-1.8157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	54050110	135075077	49899	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	446120	133647740	77210	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	760163	131671419	73893	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	18348806	114005560	56592	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	19571208	105059083	49397	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	15	21238778	99701830	44495	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	593460	87907437	40851	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	933971	78510305	36960	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	319586	75210228	42625	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	235018	41255589	14596	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	41256598	41259934	2	-1.6222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	41260638	63570038	9344	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	403764	61690281	37268	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	21	14269492	46503202	20567	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	15803930	47717016	16916	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	3167107	20660859	7066	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20666661	20667813	2	-2.789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20667988	24427899	1996	-0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24428204	24428506	2	-4.7688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24428606	47551573	11042	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	47552501	47552584	2	-2.4721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	47552619	68233467	6084	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	68233792	68233917	2	-3.0922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	68233928	123423327	23716	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123423687	123423700	2	-3.7856
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123425218	154558783	13733	0.0105
