Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	1	3218610	247813706	129028	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	2	484222	242476062	131205	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	2212571	6906622	2209	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6907006	6911400	5	-1.0772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	6912613	72637774	39597	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72639229	72639332	2	-2.159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	3	72641416	197538677	64491	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	4	1053934	188763651	102647	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	914233	73302623	38705	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73303022	73307983	2	-2.7366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	5	73309362	180360469	61708	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	6	1014281	170903919	96406	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	7	705284	158385118	81267	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	8	617667	145232496	81487	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	9	789932	140938752	67991	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	415240	7546135	4815	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	7546344	7547200	2	-1.5607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	7549849	32075621	17231	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	32081367	32082658	3	-1.4082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	32083617	54379386	8857	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	54379451	54379638	2	-1.8157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	10	54380104	135225087	49897	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	11	456120	134142530	77200	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	12	889902	133161346	73888	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	13	19450806	114987458	56588	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	14	20501368	105988038	49395	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	15	23687685	101884307	44493	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	16	653459	89379936	40787	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	17	987221	80917016	36960	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	18	329586	77109240	42622	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	284018	36563749	14596	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	36564758	36568094	2	-1.6222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	19	36568798	58878226	9344	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	20	455764	62219837	37271	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	21	15347621	47678774	20566	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	22	17423930	49331012	16915	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	3157107	20750938	7067	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20756740	20757892	2	-2.789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	20758067	24517978	1996	-0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24518283	24518585	2	-4.7688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	24518685	123595646	40864	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123596006	123596019	2	-3.7856
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F02_801932	X	123597537	154905589	13731	0.0105
