Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	1	3208470	156055882	71525	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	1	156058926	156064599	2	-1.604
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	1	156064624	191411270	22699	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	1	191414359	191414974	4	-1.2095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	1	191415154	245880329	34731	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	2	474222	242124735	131190	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	3	526235	62036436	34129	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	3	62037660	62038764	2	-1.4551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	3	62039557	64729072	2115	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	3	64729609	64730377	2	-1.4251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	3	64730477	199023074	70044	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	4	1043934	172293420	94283	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	4	172297338	172312520	11	-0.8343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	4	172316617	189836143	8343	-0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	5	967233	180293075	100405	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	6	959281	170745844	96393	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	7	671810	158077879	81264	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	8	607667	145304484	81471	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	9	779932	140058573	67962	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	10	405240	135075077	80795	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	11	446120	133647740	77202	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	12	760163	76008039	41479	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	12	76012433	76089203	62	0.5409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	12	76097723	130647154	32104	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	12	130647557	130647952	3	-1.1889
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	12	130648208	131671419	237	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	13	18348806	84755066	38254	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	13	84759149	84765621	12	0.6705
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	13	84766964	94887678	6185	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	13	94890987	94894349	6	-0.9246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	13	94897500	114005560	12133	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	14	19571208	67437393	26375	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	14	67441108	67443940	3	-1.1051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	14	67447924	105059083	23006	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	15	21238778	99701830	44489	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	16	593460	87907437	40841	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	17	933971	78510305	36957	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	18	319586	14013032	8107	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	18	14016498	14016535	2	-1.4247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	18	14016962	75210228	34510	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	19	235018	63570038	23937	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	20	403764	61690281	37250	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	21	14269492	46503202	20565	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	22	15803930	26092566	3435	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	22	26092699	26096318	2	-1.7197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	22	26096745	47590928	13427	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	22	47596773	47600038	3	-1.1381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	22	47601109	47717016	46	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	X	3167107	86863914	33760	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	X	86869178	86878491	11	0.6291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F05_801996	X	86882005	154558783	29971	-0.0019
