Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	1	3208470	245880329	128981	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	2	474222	186697090	99460	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	2	186699381	186699816	2	-1.4106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	2	186699849	242124735	31741	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	3	526235	122119163	66037	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	3	122119614	122119943	2	-1.6339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	3	122120086	199023074	40271	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	4	1043934	156175742	85291	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	4	156176451	156176798	3	-1.2802
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	4	156178887	189836143	17345	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	5	967233	180293075	100420	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	6	959281	170745844	96393	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	7	671810	158077879	81267	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	8	607667	145304484	81480	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	9	779932	81560072	31240	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	9	81562455	81563679	2	-1.3404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	9	81563905	140058573	36731	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	10	405240	98907975	57883	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	10	98907988	98920414	11	0.4552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	10	98923749	135075077	22910	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	11	446120	2741933	714	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	11	2741967	2742118	2	-1.4079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	11	2742878	133647740	76494	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	12	760163	124710262	70875	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	12	124712048	124712212	2	-1.4149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	12	124712267	131671419	3012	-0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	13	18348806	100261465	47689	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	13	100263685	100266808	4	-1.0522
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	13	100271698	114005560	8903	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	14	19571208	99223985	46810	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	14	99226524	99230133	3	-1.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	14	99232130	105059083	2580	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	15	21238778	77447673	31319	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	15	77449095	77449140	2	-1.3031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	15	77449301	99701830	13171	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	16	593460	49640592	16494	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	16	49641481	49641797	2	-1.305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	16	49641826	87907437	24352	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	17	933971	46279464	19926	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	17	46280647	46283943	4	-1.1264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	17	46288651	58366889	6848	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	17	58369006	58371155	4	-0.9129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	17	58371324	78510305	10185	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	18	319586	49741464	28556	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	18	49741863	49743319	3	-1.073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	18	49744939	59738698	6458	-0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	18	59738712	59738730	2	-1.1863
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	18	59738774	75210228	7598	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	19	235018	63570038	23947	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	20	403764	61690281	37261	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	21	14269492	46503202	20569	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	22	15803930	47717016	16920	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F08_802004	X	3167107	154558783	63740	0.0014
