Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	3218610	92541729	51370	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	92543255	92544692	2	-1.7592
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	92548348	119043914	15474	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	119044076	119045374	3	-1.3992
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	119045555	151144923	1327	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	151145866	151146186	2	-2.3529
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	1	151155327	247813706	60838	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	2	484222	40294457	23364	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	2	40299713	40311297	3	-1.4915
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	2	40317517	242476062	107805	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	3	2212571	14672358	7532	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	3	14672637	14674721	2	-2.6865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	3	14676294	197538677	98755	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	4	1053934	80418631	43596	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	4	80425028	80425343	4	-1.1641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	4	80425739	170991262	50099	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	4	170992450	170993260	2	-1.995
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	4	170993592	188763651	8930	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	5	914233	73082942	38520	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	5	73083052	73087224	3	-2.1481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	5	73089700	180360469	61874	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	6	1014281	73530327	40010	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	6	73530344	73530417	2	-2.2833
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	6	73530452	170903919	56385	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	7	705284	55190236	32534	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	7	55190441	55190485	2	-2.2798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	7	55190489	158385118	48730	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	8	617667	145232496	81483	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	9	789932	3035385	1627	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	9	3036131	3040307	2	-1.7005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	9	3040468	34561188	19109	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	9	34561808	34588006	23	0.4991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	9	34588893	140938752	47217	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	10	415240	108777244	63583	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	10	108777343	108777839	2	-1.878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	10	108782757	129129348	14132	-0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	10	129130023	129135104	2	-1.5835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	10	129136104	135225087	3077	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	11	456120	134142530	77188	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	12	889902	112989310	63132	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	12	112989862	112992519	3	-1.5542
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	12	112996603	133161346	10733	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	13	19450806	114987458	56573	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	14	20501368	105988038	49392	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	15	23687685	101884307	44473	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	16	653459	89379936	40780	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	17	987221	80917016	36964	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	18	329586	77109240	42616	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	19	284018	16761943	6320	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	19	16765698	16768193	2	-1.7799
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	19	16769216	58878226	17618	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	20	455764	62219837	37265	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	21	15347621	47678774	20562	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	22	17423930	49331012	16917	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_F12_801942	X	3157107	154905589	63745	0.0025
