Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	1	3208470	66736367	35881	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	1	66738063	66738697	2	-1.8121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	1	66741157	66993975	245	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	1	66995522	67002793	6	-0.9475
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	1	67002933	245880329	92762	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	2	474222	207547751	110234	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	2	207548577	207550265	3	-1.6569
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	2	207550428	242124735	20910	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	3	526235	199023074	106256	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	4	1043934	189836143	102589	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	967233	71873523	37756	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	71875718	71880634	3	-2.8606
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	71880674	169795841	56966	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	169797871	169802222	5	-1.3481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	169802892	172510027	1519	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	172513594	172515749	2	-1.719
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	5	172517380	180293075	4110	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	959281	51000687	29860	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	51001210	51001250	2	1.8142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	51007232	69661807	7889	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	69665861	69678661	6	-0.9737
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	69684996	120309376	28278	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	120310405	120316081	2	-1.5651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	6	120316602	170745844	30328	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	7	671810	158077879	81236	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	8	607667	145304484	81439	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	9	779932	34551188	20722	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	9	34551808	34578893	24	0.6438
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	9	34584906	140058573	47192	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	405240	58811369	33342	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	58815819	58816782	4	-1.0644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	58821555	86474756	16985	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	86478240	86483370	2	-1.3585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	86484042	110498713	14408	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	110499148	110503291	2	-1.5727
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	10	110503949	135075077	16019	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	11	446120	133647740	77176	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	12	760163	131671419	73854	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	13	18348806	114005560	56557	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	14	19571208	80439264	34550	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	14	80442493	80442498	2	-1.7749
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	14	80444575	105059083	14829	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	15	21238778	99701830	44461	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	16	593460	49946529	16703	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	16	49946850	49947054	2	-2.3466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	16	49950700	87907437	24126	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	17	933971	78510305	36954	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	18	319586	75210228	42604	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	19	235018	63570038	23939	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	20	403764	61690281	37246	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	21	14269492	46503202	20556	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	22	15803930	47717016	16917	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G01_802036	X	3167107	154558783	63645	-3e-04
