Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	1	3218610	247813706	128963	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	2	484222	236749943	127833	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	2	236751087	236754400	2	-2.298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	2	236755574	242476062	3315	0.0262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	3	2212571	197538677	106242	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	4	1053934	188763651	102609	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	5	914233	151068673	82367	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	5	151073377	151085698	10	-0.8748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	5	151086492	180360469	17994	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	6	1014281	2355313	977	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	6	2355375	2355806	4	-1.4634
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	6	2359712	103155792	55298	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	6	103156382	103175195	14	-0.6126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	6	103175694	170903919	40080	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	7	705284	158385118	81244	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	8	617667	14257984	6301	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	8	14258141	14273370	41	-0.7301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	8	14277111	19839546	4181	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	8	19840670	19842188	2	-2.0864
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	8	19842932	145232496	70924	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	9	789932	140938752	67942	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	10	415240	135225087	80762	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	11	456120	105049805	57668	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	11	105050206	105066898	10	-1.0658
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	11	105069826	134142530	19499	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	12	889902	94049398	51276	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	12	94053664	94059555	3	-1.5228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	12	94059866	133161346	22566	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	19450806	34059988	8925	0.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	34067734	34068981	2	-2.5543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	34072198	94100353	34110	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	94102739	94103157	2	-1.862
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	94103536	113406699	13089	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	113409601	113411429	3	-1.5109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	13	113412139	114987458	428	0.0376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	14	20501368	78786339	32849	0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	14	78788255	78791625	6	-1.2101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	14	78792004	105988038	16515	0.0238
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	15	23687685	81057687	32394	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	15	81058507	81058640	2	-2.1152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	15	81062393	101884307	12071	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	16	653459	89379936	40762	0.0311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	17	987221	34037420	13566	0.0504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	17	34044342	34044376	2	-1.9249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	17	34044427	80917016	23377	0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	18	329586	77109240	42609	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	19	284018	58878226	23909	0.0575
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	20	455764	62219837	37236	0.0294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	21	15347621	36092923	13119	0.0131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	21	36093062	36093667	2	-2.1484
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	21	36099019	47678774	7440	0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	17423930	18398457	573	-1.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	18398976	18403629	2	-6.3071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	18404655	32939340	5764	-1.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	32939476	32940660	5	-4.6172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	32940844	36533785	2789	-1.0337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	36584713	36584946	2	-6.5883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	36585564	46488228	5377	-1.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	46489201	46532781	15	-3.1586
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	46534046	47749241	822	-1.0967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	47752111	47786662	35	-2.4255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	47786891	48832793	886	-1.0952
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	48834199	48835845	3	-6.2974
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	22	48836017	49331012	344	-1.3334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G02_802056	X	3157107	154905589	63750	0.0015
