Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	1	3208470	245880329	128931	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	2	474222	242124735	131177	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	3	526235	199023074	106279	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	1043934	83496785	45263	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	83497817	83498427	2	-1.6735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	83503184	125678855	23727	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	125679801	125682385	3	-1.7256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	125682475	189836143	33633	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	5	967233	180293075	100390	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	959281	49799180	29185	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	49799206	49803889	3	-1.72
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	49809177	56398501	4251	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	56398774	56398907	4	-1.4315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	56400276	170745844	62924	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	671810	2120715	382	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	2124694	2125740	2	-1.6034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	2127625	158077879	80868	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	8	607667	145304484	81468	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	9	779932	140058573	67959	-0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	10	405240	135075077	80785	-0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	11	446120	133647740	77179	-0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	12	760163	131671419	73870	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	13	18348806	114005560	56573	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	19571208	19966697	253	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	19968187	19968282	2	-1.5535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	19968757	73469381	29786	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	73473295	73475430	2	-1.7724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	73475784	105059083	19340	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	21238778	32876724	4761	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	32879670	32880524	3	-1.1871
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	32881873	99701830	39717	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	16	593460	87907437	40833	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	17	933971	78510305	36954	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	18	319586	75210228	42620	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	19	235018	63570038	23929	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	403764	40948453	23515	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	40950113	40950784	2	-1.7617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	40950805	61690281	13732	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	21	14269492	46503202	20566	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	22	15803930	47717016	16913	-0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	X	3167107	154558783	63735	0.0015
