Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	1	3218610	247813706	128985	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	2	484222	242476062	131169	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	3	2212571	197538677	106273	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	1053934	83277761	45260	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	83278793	83279403	2	-1.6735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	83284160	125459405	23734	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	125460351	125462935	3	-1.7256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	4	125463025	188763651	33634	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	5	914233	180360469	100390	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	1014281	49691221	29185	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	49691247	49695930	3	-1.72
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	49701218	56290542	4253	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	56290815	56290948	4	-1.4315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	6	56292317	170903919	62931	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	705284	2154189	382	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	2158168	2159214	2	-1.6034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	7	2161099	158385118	80869	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	8	617667	145232496	81475	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	9	789932	140938752	67971	-0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	10	415240	135225087	80783	-0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	11	456120	134142530	77169	-0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	12	889902	133161346	73865	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	13	19450806	114987458	56569	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	20501368	20896857	253	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	20898347	20898442	2	-1.5535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	20898917	74399628	29783	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	74403542	74405677	2	-1.7724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	14	74406031	105988038	19341	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	23687685	35089432	4762	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	35092378	35093232	3	-1.1871
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	15	35094581	101884307	39714	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	16	653459	89379936	40769	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	17	987221	80917016	36954	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	18	329586	77109240	42617	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	19	284018	58878226	23929	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	455764	41515039	23518	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	41516699	41517370	2	-1.7617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	20	41517391	62219837	13732	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	21	15347621	47678774	20565	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	22	17423930	49331012	16912	-0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G04_801946	X	3157107	154905589	63752	0.0014
