Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	51598	17055024	8827	0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	17062591	17157507	68	0.5849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	17158797	47837744	17461	0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	47837925	47843935	4	-1.7179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	47844136	72522941	16569	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72528701	72535958	9	-3.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72541006	72583736	48	1.8655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72584492	110025950	23680	0.0131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	110027165	110047796	35	1.2247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	110047801	150819115	10006	0.0347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	150819378	150853218	40	0.5218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	150857118	155745162	2704	0.0365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	155749078	155749571	2	-2.3208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	155749897	197377986	28474	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	197378144	197380463	7	-1.8443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	197380861	241195975	30759	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	241201330	241349107	30	0.5632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	241359750	246804070	3571	0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	246815817	246875992	37	-0.8363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	246885106	247191011	138	0.1243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	2784	13452427	10181	0.0354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	13454385	13454841	2	-2.1779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	13455187	32547708	12431	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	32550349	32553219	4	-1.6223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	32554094	97197809	38623	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	97197847	97239927	20	0.6885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	97240000	106249661	5619	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	106249763	106251789	7	-2.5829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	106253687	130505230	14337	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	130505244	130565774	15	1.0761
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	130580429	238576317	66397	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	238587040	238728613	77	0.5082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	238729218	242738129	2206	0.0572
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	35345	6626128	5838	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	6626211	6627676	16	-1.0893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	6628068	59716902	34511	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	59719703	59720741	2	-2.3662
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	59721113	75447120	12298	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	75447170	75995041	182	0.3841
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	75995932	131232896	29673	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	131236625	131415936	104	0.4505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	131415994	164013564	20238	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	164015644	164023184	7	-1.5886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	164028410	164108674	47	0.6991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	164108689	166523557	1318	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	166524242	166564633	65	-0.9273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	166568123	167004417	279	0.0151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	167005298	167022304	9	-0.9568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	167022510	187869381	12743	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	187869511	187888639	28	0.5344
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	187888817	194360656	4735	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	194360739	194365597	18	-0.9465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	194369129	196868323	1486	0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	196875861	196959853	45	0.5033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	196960434	199380515	1174	0.0453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	2281	141232	106	0.0605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	142390	142806	2	-2.1769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	145365	3855606	1534	0.0493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	3867542	4227530	79	0.5258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	4228074	8773152	3460	0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	8775443	9066075	62	0.3581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9070328	9088443	9	2.645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9095185	9263088	48	0.571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9268492	9804969	461	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9805859	9856610	82	0.3801
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9857272	34455420	16954	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	34455435	34501120	40	0.5376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	34506267	48849526	8968	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	48856515	49351352	31	0.5368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	49352980	87194247	21360	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	87195118	87198788	19	-0.7915
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	87198968	108270949	12426	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	108285200	108295982	38	-0.7806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	108296883	191022559	51589	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	191028537	191261904	62	0.4905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	68532	46245639	30762	0.0234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46245675	46307687	14	0.536
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46308278	46309259	5	1.6529
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46313969	49538013	31	0.4643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	49555769	57357403	5040	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	57361784	57369290	32	2.8959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	57374114	180722926	77117	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	94661	29945051	21726	0.0261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	29945166	29982787	24	1.4722
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	29984938	31456179	723	0.1068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	31456449	31456627	3	2.1508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	31459014	32560907	456	0.1254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32562253	32681749	33	1.2861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32681992	32717405	26	0.0345
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32732282	32734596	6	1.9688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32758590	32798005	45	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32798775	32798808	3	2.1633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32798923	52719343	12683	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	52720863	52772441	52	0.4499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	52772531	54039339	952	0.026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	54039378	54039762	2	2.5282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	54039814	170892930	73116	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	52911	6830772	3448	0.0468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	6833603	6931044	37	0.6569
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	6932420	61757230	37242	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	61761020	61868111	31	0.8467
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	61889637	64641924	1112	0.0765
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	64663927	64697999	10	0.9293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	64703608	75186242	4833	0.0326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	75186441	75202174	10	0.9422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	75212593	90878394	9985	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	90878525	90878663	2	-2.5997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	90884929	97223587	3963	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	97223671	97239913	15	0.7361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	97239981	109224337	6632	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	109224905	109228448	16	0.7007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	109228480	125368029	9712	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125371603	125379903	14	-0.9748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125380576	125832792	313	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125832887	125834112	11	1.8829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125834113	127950130	1401	0.0303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	127950571	128095225	28	0.5488
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	128095622	133435717	3271	0.0293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	133435735	133440983	25	-1.7249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	133446174	141409593	5206	0.0269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141416112	141434115	33	-0.7107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141434368	141690917	199	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141691401	141726987	15	0.7563
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141732907	158819765	10844	0.0462
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	21254	5852335	6456	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	5856208	5856253	2	-2.9331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	5857346	8235635	1726	0.1
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	8236281	8242420	7	-1.1025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	8242546	11883891	3085	0.0623
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	11888565	12595506	155	0.6186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	12595821	13548047	911	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	13548548	13561292	13	-0.7531
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	13563832	18309434	4373	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	18310437	18310587	2	-2.1249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	18315400	25030393	5089	0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	25030439	25040140	23	-2.1482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	25040167	27037581	1568	0.0358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	27037606	27037902	2	-1.7664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	27039603	32798408	3871	0.0307
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	32802640	32807955	8	1.3676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	32811648	40891153	4711	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	40897009	40897628	2	-2.2057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	40902837	137860824	58756	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	137861009	137861759	5	-1.8387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	137862416	146268959	5093	0.0605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	36587	592903	511	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	596699	596893	3	-1.9159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	596961	8168098	7377	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	8169592	8170027	2	-2.4058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	8170123	9306185	995	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	9306533	9337920	40	-0.4702
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	9338102	41723631	22383	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	41832529	43177963	33	0.6211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	43255666	43730342	40	-0.1724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	43740182	45953932	154	0.3683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	46003398	66062879	32	1.0631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	66210379	70195398	287	0.3938
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	70196395	103879489	23616	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	103879660	103918307	55	-0.3836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	103918741	105606318	1158	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	105608517	105609111	2	-2.6273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	105610523	140211215	23156	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	62759	24415269	19224	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	24417680	24418914	12	0.999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	24418957	41793879	9921	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	41793999	42070878	35	0.4897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	42080059	45632493	2345	0.0271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	45905767	45931287	4	2.1261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	45947683	66977929	13154	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	66977942	66983868	22	0.7303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	66984086	135356694	46282	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	188510	723609	174	0.1094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	723639	735581	8	0.9163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	738946	4195630	1607	0.0595
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4206589	4212883	4	-1.0892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4218568	4229734	8	-0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4232580	4264575	9	-1.3769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4276288	5743981	1491	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	5744656	5765715	32	-2.4437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	5765914	25175721	14425	0.0232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	25177588	25195933	10	-1.0449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	25196109	50374180	16414	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	50375549	51095288	82	0.4992
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	51123597	67106475	6591	0.0431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	67106630	67505898	131	0.4224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	67520656	80942760	8085	0.0333
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	80942869	80944755	2	-2.1132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	80946633	81339851	338	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81340294	81340672	3	1.7807
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81346292	101694918	14249	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	101701229	101701760	4	-2.0342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	101705352	109593075	5192	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	109593796	109596343	2	-2.4847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	109596855	134146683	17979	0.0339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134146766	134149492	7	-0.9043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134150567	134435899	210	0.144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134437775	134449982	10	-0.3339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	20703	7897773	5375	0.0504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	7899066	8015167	58	0.6406
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8022225	8310921	139	0.0673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8312091	8340484	8	1.2445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8344733	8447960	38	0.3691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8449755	8472408	21	1.2979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8475939	9525137	567	0.0587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	9529176	9604941	21	-1.2591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	9606832	98319424	55997	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	98319599	98321220	19	0.8819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	98321940	130698621	22172	0.0342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	130698636	130699222	6	-2.5789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	130699251	132288262	576	0.0621
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	17924949	18267592	83	0.5285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	18293638	36969135	13463	-0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	36970036	36982757	16	-2.4693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	36986330	83020497	29472	-0.0487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	83020735	83039380	21	-0.7386
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	83039708	114126499	21175	-0.036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	18072124	18405751	23	0.0376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	18452209	18776758	29	0.9901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	18801410	19495349	140	0.5858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	19495700	27140329	5150	0.0285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	27140343	27270368	69	-0.3327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	27272946	85521650	37152	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	85521664	85559964	38	-1.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	85560087	105953387	12654	0.029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	105960424	105989114	46	-0.6449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	105989139	106356482	226	0.135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18276341	18412742	28	0.6169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18415652	18771168	48	-0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18782353	18838175	18	-0.6652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18838318	18841469	8	0.6298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18841576	18846118	5	0.1305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18846375	18887022	35	-0.5692
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	18887506	19074991	11	0.5308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	19080081	19456870	130	-0.3487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	19456985	19813175	31	0.2634
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	19818876	20232440	108	-0.6971
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20232614	26718825	3814	0.0284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	26720094	26814079	47	0.5629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	26830939	30297384	1983	0.0629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	30297502	30599821	46	0.5226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	30609825	100149580	45645	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	100152380	100187168	27	0.881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	100187234	100286563	30	0.1772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	777	19854445	13529	0.0584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	19854647	19873376	23	-0.5905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	19874863	30084754	5839	0.0615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	30085308	30097482	2	-2.3664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	30097543	32496123	760	0.051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32496402	32496410	5	-2.6894
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32516775	32563024	25	-0.3797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32650790	33277265	61	0.313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33279107	33510435	65	-0.1613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33510638	33515894	4	-1.3638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33517284	52026888	4970	0.0457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	52026964	52027308	2	-1.8289
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	52027430	54352549	2018	0.0329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	54352715	54374147	19	-0.6978
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	54374206	68755897	8780	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	68768945	68803426	4	1.5892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	68803834	76930838	5714	0.0315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	76931265	76942266	13	0.9645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	76942502	77815838	1201	0.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	77818019	77830763	8	-1.3732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	77830814	88815036	9424	0.063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	526	50521650	28639	0.047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	50521793	50551290	19	0.5607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	50556452	66393165	9494	0.0274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	66393174	66403424	5	-1.4493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	66403833	78643088	7112	0.0693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	1543	14223534	10084	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	14223681	14326536	16	0.87
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	14329531	35291861	11929	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	35294364	35321214	13	-0.805
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	35322632	36514468	761	-0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	36514478	36523810	18	-1.1202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	36524070	61791388	17435	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	61791519	61819592	19	-0.714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	61820056	76116029	10464	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	41910	15685071	6662	0.0453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	15685942	15685943	2	-2.5116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	15686598	56823625	18285	0.05
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	56834164	56846717	12	-1.088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	56847282	58008152	790	0.0547
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	58010916	58054517	51	0.7093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	58055950	63789666	3542	0.0754
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	9305	26145899	20000	0.0325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	26145931	29302279	111	0.3603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	29307539	62426597	22351	0.041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	21	9758742	46921385	24383	0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	14432528	14857516	66	0.5179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	14870546	15406042	68	0.0267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	15410792	22662933	4470	-0.3352
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	22667307	22700430	12	-0.8361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	22701070	22715546	4	-3.2015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	22716631	24034230	843	-0.4342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	24035314	24085649	62	-0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	24086109	37667446	9926	-0.4434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	37668087	37725453	48	0.0645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	37729258	49535344	7974	-0.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	49535372	49581321	11	0.2389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	108477	38438994	24049	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	38442369	38471132	23	0.5779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	38476577	53788754	7400	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	53789710	54019750	93	1.0999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	54024614	154835548	52966	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	2710438	6161425	839	-2.3109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	6167901	6489434	131	-3.4543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	6498630	17572959	4410	-2.8093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	17577516	17679836	42	-3.3639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	17688729	17688934	3	-7.5064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	17691665	19547685	899	-3.205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	19547873	22268551	1052	-2.863
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	22268856	24651237	519	-3.272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	24654213	24818154	37	-2.3567
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	24819177	24826480	4	-5.1687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	24826889	24919963	33	-1.9343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	24920187	25776875	95	-3.7835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	25846090	25938472	34	-1.8911
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	25944418	26009711	21	-3.3868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26011215	26127678	36	-2.099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26129939	26687080	196	-3.3984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26699115	26730008	11	-5.0497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26731140	26833326	45	-3.1792
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26847504	57427647	183	-2.345
