Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	61735	17182437	8827	0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	17190004	17284920	68	0.5849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	17286210	48065157	17458	0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	48065338	48071348	4	-1.7179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	48071549	72750353	16643	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72756113	72763370	9	-3.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72768418	72811148	48	1.8655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	72811904	110224427	23671	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	110225642	110246273	35	1.2247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	110246278	152552491	10003	0.0347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	152552754	152586594	40	0.5218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	152590494	157478538	2704	0.0365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	157482454	157482947	2	-2.3208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	157483273	199111363	28473	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	199111521	199113840	7	-1.8443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	199114238	243129352	30758	0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	243134707	243282484	30	0.5632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	243293127	248737447	3569	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	248749194	248809369	38	-0.8078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	1	248818483	249224388	138	0.1243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	12784	13534976	10179	0.0354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	13536934	13537390	2	-2.1779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	13537736	32694204	12431	0.0245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	32696845	32699715	4	-1.6223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	32700590	97834082	38614	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	97834120	97876200	20	0.6885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	97876273	106883229	5619	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	106883331	106885357	7	-2.5829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	106887255	111051550	2203	0.0249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	111052343	111060867	2	-2.4359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	111061274	130788760	12130	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	130788774	130849304	15	1.0761
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	130863959	238911578	66398	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	238922301	239063874	77	0.5082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	2	239064479	243089456	2206	0.0572
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	60345	6651128	5838	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	6651211	6652676	16	-1.0893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	6653068	59741862	34512	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	59744663	59745701	2	-2.3662
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	59746073	75364430	12296	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	75364480	75912351	182	0.3841
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	75913242	129750206	29668	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	129753935	129933246	104	0.4505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	129933304	162530870	20237	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	162532950	162540490	7	-1.5886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	162545716	162625980	47	0.6991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	162625995	165040863	1317	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	165041548	165081939	65	-0.9273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	165085429	165521723	279	0.0151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	165522604	165539610	9	-0.9568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	165539816	186386687	12745	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	186386817	186405945	28	0.5344
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	186406123	192877962	4735	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	192878045	192882903	18	-0.9465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	192886435	195383142	1486	0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	195390680	195474182	45	0.5033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	3	195474763	197896118	1174	0.0453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	12281	151232	106	0.0605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	152390	152806	2	-2.1769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	155365	3885808	1534	0.0493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	3897744	4176629	79	0.5258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	4177173	8722252	3460	0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	8724543	9456977	62	0.3581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9461230	9479345	9	2.645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9486087	9653990	48	0.571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	9659394	10195871	461	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	10196761	10247512	82	0.3801
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	10248174	34779025	16954	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	34779040	34824725	40	0.5376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	34829872	49154769	8967	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	49161758	49656595	31	0.5368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	49658223	86975223	21361	0.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	86976094	86979764	19	-0.7915
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	86979944	108051500	12429	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	108065751	108076533	38	-0.7806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	108077434	190785565	51592	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	4	190791543	191027923	62	0.4905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	15532	46209882	30761	0.0235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46209918	46271930	14	0.536
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46272521	46273502	5	1.6529
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	46278212	49502256	31	0.4643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	49520012	57321646	5039	0.0139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	57326027	57333533	32	2.8959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	57338357	68829347	7295	0.0224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	68846303	70391253	27	0.6827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	70654072	98978547	16665	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	98978892	99025762	34	-0.6019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	99031745	115341638	10606	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	115342559	115342913	2	-2.6587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	5	115343067	180790320	42491	0.0276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	149661	29837072	21725	0.0261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	29837187	29874808	24	1.4722
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	29876959	31348200	723	0.1068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	31348470	31348648	3	2.1508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	31351035	32452929	456	0.1254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32454275	32573771	33	1.2861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32574014	32622194	28	-0.0469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32624304	32626618	6	1.9688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32650612	32690027	45	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32690797	32690830	3	2.1633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	32692227	52611384	12682	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	52612904	52664482	52	0.4499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	52664572	53931380	952	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	53931419	53931803	2	2.5282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	6	53931855	171051005	73122	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	43355	6864247	3446	0.0466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	6867078	6964519	37	0.6569
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	6965895	62119795	37239	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	62123585	62230676	31	0.8467
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	62252202	65004489	1113	0.0766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	65026492	65060564	10	0.9293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	65066173	75348306	4834	0.0325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	75348505	75364238	10	0.9422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	75374657	91040458	9987	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	91040589	91040727	2	-2.5997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	91046993	97385651	3965	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	97385735	97401977	15	0.7361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	97402045	109437101	6633	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	109437669	109441212	16	0.7007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	109441244	125580793	9713	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125584367	125592667	14	-0.9748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	125593340	126045556	313	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	126045651	126046876	11	1.8829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	126046877	128162894	1402	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	128163335	128307989	28	0.5488
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	128308386	133785177	3271	0.0293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	133785195	133790443	25	-1.7249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	133795634	141763124	5206	0.0269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141769643	141787646	33	-0.7107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	7	141787899	159127004	11057	0.0465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	31254	5864927	6457	0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	5868800	5868845	2	-2.9331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	5869938	8198225	1726	0.1
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	8198871	8205010	7	-1.1025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	8205136	11846482	3083	0.0621
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	11851156	12551135	156	0.6198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	12551450	13503676	911	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	13504177	13516921	13	-0.7531
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	13519461	18265154	4373	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	18266157	18266307	2	-2.1249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	18271120	24974476	5089	0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	24974522	24984223	23	-2.1482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	24984250	26981664	1569	0.0358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	26981689	26981985	2	-1.7664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	26983686	32678866	3871	0.0307
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	32683098	32688413	8	1.3676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	32692106	40771996	4711	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	40777852	40778471	2	-2.2057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	40783680	137791642	58762	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	137791827	137792577	5	-1.8387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	8	137793234	146298155	5093	0.0605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	46587	602903	513	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	606699	606893	3	-1.9159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	606961	8178098	7377	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	8179592	8180027	2	-2.4058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	8180123	9316185	995	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	9316533	9347920	40	-0.4702
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	9348102	41733631	22389	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	41842529	43187967	33	0.6211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	43315670	43790346	40	-0.1724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	43800186	46063936	154	0.3683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	46113402	66323059	32	1.0631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	66470559	71005578	288	0.3878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	71006575	104839668	23618	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	104839839	104878486	55	-0.3836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	104878920	106566497	1158	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	106568696	106569290	2	-2.6273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	9	106570702	141091394	23160	0.0225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	72759	24375263	19223	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	24377674	24378908	12	0.999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	24378951	42473873	9921	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	42473993	42750872	35	0.4897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	42760053	46312487	2345	0.0271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	46485761	46511281	4	2.1261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	46527677	67307923	13154	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	67307936	67313862	22	0.7303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	10	67314080	135506704	46280	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	198510	733609	174	0.1094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	733639	745581	8	0.9163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	748946	4239054	1606	0.0596
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4250013	4256307	4	-1.0892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4261992	4273158	8	-0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4276004	4307999	9	-1.3769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	4319712	5787405	1491	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	5788080	5809139	32	-2.4437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	5809338	25219145	14424	0.0232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	25221012	25239357	10	-1.0449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	25239533	50417604	16412	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	50418973	51238712	82	0.4992
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	51267021	67349899	6591	0.043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	67350054	67749322	131	0.4224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	67764080	81265112	8086	0.0333
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81265221	81267107	2	-2.1132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81268985	81662203	337	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81662646	81663024	3	1.7807
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	81668644	102189708	14246	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	102196019	102196550	4	-2.0342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	102200142	110087865	5190	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	110088586	110091133	2	-2.4847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	110091645	134641473	17977	0.0339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134641556	134644282	7	-0.9043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134645357	134930689	210	0.144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	11	134932565	134944770	10	-0.3339
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	150442	8006506	5375	0.0504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8007799	8123900	58	0.6406
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8130958	8419654	139	0.0673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8420824	8449217	8	1.2445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8453466	8556693	38	0.3691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8558488	8581141	21	1.2979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	8584672	9633870	566	0.0584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	9637909	9713674	21	-1.2591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	9714954	99795293	55992	0.0214
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	99795468	99797089	19	0.8819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	99797809	132132668	22170	0.0342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	132132683	132133269	6	-2.5789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	12	132133298	133778189	576	0.0621
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	19026949	19369592	83	0.5285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	19395638	38071135	13461	-0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	38072036	38084757	16	-2.4693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	38088330	84122496	29471	-0.0487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	84122734	84141379	21	-0.7386
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	13	84141707	115108397	21174	-0.036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	19002124	19335751	23	0.0376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	19382209	19706758	29	0.9901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	19731410	20425509	140	0.5858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	20425860	28070489	5150	0.0285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	28070503	28200528	69	-0.3327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	28203106	86451897	37149	0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	86451911	86490211	38	-1.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	86490334	106882342	12654	0.029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	106889379	106918069	46	-0.6449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	14	106918094	107285437	226	0.135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20016328	20152728	28	0.6169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20155638	20511154	48	-0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20522339	20578161	18	-0.6652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20578304	20581455	8	0.6298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20581562	20586104	5	0.1305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20586361	20627008	35	-0.5692
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20627492	20814977	11	0.5308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	20820067	21134024	99	-0.3281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	21134487	21186400	15	-0.7945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	21188006	22311811	47	0.154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	22317512	22681076	108	-0.6971
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	22681250	28919784	3815	0.0285
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	28921053	29015038	47	0.5629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	29031898	32510092	1983	0.0629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	32510210	32812529	46	0.5226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	32822533	102332057	45641	0.027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	102334857	102369645	27	0.881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	15	102369711	102469040	30	0.1772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	60777	19946944	13528	0.0583
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	19947146	19965875	23	-0.5905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	19967362	30177253	5838	0.0614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	30177807	30189981	2	-2.3664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	30190042	32588622	760	0.051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32588901	32588909	5	-2.6894
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32609274	32655523	25	-0.3797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	32743289	33369764	61	0.313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33371606	33602934	65	-0.1613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33603137	33608393	4	-1.3638
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	33609783	53469387	4970	0.0457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	53469463	53469807	2	-1.8289
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	53469929	55795048	2018	0.0329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	55795214	55816646	19	-0.6978
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	55816705	70198396	8780	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	70211444	70245925	4	1.5892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	70246333	78373337	5639	0.0323
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	78373764	78384765	13	0.9645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	78385001	79258337	1201	0.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	79260518	79273262	8	-1.3732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	16	79273313	90287535	9427	0.0631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	526	53166651	28640	0.047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	53166794	53196291	19	0.5607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	53201453	68881570	9493	0.0274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	68881579	68891829	5	-1.4493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	17	68892238	81049726	7112	0.0693
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	11543	14233534	10084	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	14233681	14336536	16	0.87
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	14339531	37037863	11928	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	37040366	37067216	13	-0.805
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	37068634	38260470	761	-0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	38260480	38269812	18	-1.1202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	38270072	63640408	17433	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	63640539	63668612	19	-0.714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	18	63669076	78015057	10464	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	90910	15824071	6662	0.0453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	15824942	15824943	2	-2.5116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	15825598	52131813	18284	0.05
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	52142352	52154905	12	-1.088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	52155470	53316340	790	0.0547
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	53319104	53362705	51	0.7093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	19	53364138	59097854	3542	0.0754
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	61305	26197899	20003	0.0324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	26197931	29838618	111	0.3603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	20	29843878	62956153	22351	0.041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	21	10736871	48096957	24382	0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	16052528	16477516	66	0.5179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	16490546	17026042	68	0.0267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	17030792	24332933	4470	-0.3352
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	24337307	24370430	12	-0.8361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	24371070	24385546	4	-3.2015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	24386631	25704230	843	-0.4342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	25705314	25755649	62	-0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	25756109	39337500	9925	-0.4435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	39338141	39395507	48	0.0645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	39399312	51204444	7978	-0.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	22	51204648	51234455	8	0.3346
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	168477	38554050	24050	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	38557425	38586188	23	0.5779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	38591633	53772029	7402	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	53772985	54003025	93	1.0999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	X	54007889	155182354	52950	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	2650438	6101425	872	-2.2476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	6107901	6429434	131	-3.4543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	6438630	19063565	4421	-2.8038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	19068122	19170442	42	-3.3639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	19179335	19179540	3	-7.5064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	19182271	21088297	899	-3.205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	21088485	23859163	1053	-2.8605
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	23859468	26241849	519	-3.272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26244825	26408766	37	-2.3567
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26409789	26417092	4	-5.1687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26417501	26510575	33	-1.9343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	26510799	27367487	95	-3.7835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	27436702	27529084	34	-1.8911
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	27535030	27600323	21	-3.3868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	27601827	27718290	36	-2.099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	27720551	28277692	196	-3.3984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	28289727	28320620	11	-5.0497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	28321752	28452016	52	-3.103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G05_802018	Y	28457337	59018259	176	-2.3343
