Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	1	3218610	94018350	52015	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	1	94018855	94019528	2	-1.9328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	1	94020297	247813706	76943	0.0231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	2	484222	242476062	131134	0.0246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	3	2212571	126180047	69193	0.0236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	3	126180088	126181071	2	-1.9291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	3	126182504	197538677	37049	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	4	1053934	188763651	102594	0.0309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	5	914233	114756455	60959	0.0306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	5	114756637	114756821	4	-1.4048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	5	114756862	180360469	39401	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	6	1014281	19453027	12962	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	6	19453429	19453594	2	-3.1582
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	6	19454738	170903919	83387	0.028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	7	705284	106834187	54144	0.038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	7	106837604	116766569	5032	-0.8279
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	7	116767428	158385118	22021	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	8	617667	145232496	81440	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	9	789932	140938752	67960	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	10	415240	135225087	80767	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	11	456120	130687652	74927	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	11	130687703	130689818	2	-1.6565
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	11	130690162	134142530	2242	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	12	889902	133161346	73858	0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	13	19450806	38050073	11623	0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	13	38052486	66823116	15172	-0.8092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	13	66823469	66823581	2	-4.5314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	13	66823666	91162669	14087	-0.8142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	13	91174877	114987458	15429	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	14	20501368	105988038	49370	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	15	23687685	101884307	44467	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	16	653459	89379936	40765	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	17	987221	80571060	36760	0.0582
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	17	80571129	80571194	2	-2.0322
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	17	80571505	80917016	186	0.1136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	18	329586	77109240	42592	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	19	284018	1439042	215	-0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	19	1441983	4975564	846	-0.8086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	19	4979743	49755059	19163	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	19	49755490	49755660	2	-2.4151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	19	49757035	58878226	3693	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	20	455764	62219837	37254	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	21	15347621	47678774	20553	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	22	17423930	49331012	16905	-0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	X	3157107	153555535	63661	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	X	153556555	153558319	3	-1.8308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G06_802022	X	153558389	154905589	79	0.0351
