Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	1	3218610	247813706	129027	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	484222	24080300	15123	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	24081683	24087968	2	-2.1751
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	24088562	150032588	62740	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	150035582	150039838	3	-1.4942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	150040224	237941362	50804	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	237943497	237945678	6	-1.2408
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	2	237947021	242476062	2511	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	3	2212571	138081822	75828	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	3	138082502	138084905	2	-2.1054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	3	138085160	197538677	30460	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	4	1053934	188763651	102634	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	5	914233	180360469	100414	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	6	1014281	170903919	96398	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	7	705284	4088166	1187	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	7	4090183	4090283	2	1.7043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	7	4094257	158385118	80079	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	8	617667	145232496	81476	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	9	789932	140938752	67979	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	10	415240	135225087	80799	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	11	456120	134142530	77198	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	12	889902	60834820	31358	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	12	60834894	60840399	4	-1.3001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	12	60840543	113960047	32377	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	12	113960330	113960795	2	-2.1367
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	12	113960805	133161346	10136	-0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	13	19450806	114987458	56582	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	14	20501368	105988038	49394	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	15	23687685	89069457	36715	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	15	89069887	89070045	2	-1.8722
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	15	89070711	101884307	7777	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	16	653459	89379936	40783	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	17	987221	80917016	36966	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	18	329586	37947473	19807	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	18	37949207	37949431	2	-2.0937
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	18	37949702	77109240	22814	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	19	284018	58878226	23944	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	20	455764	62219837	37262	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	21	15347621	47678774	20562	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	22	17423930	49331012	16922	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G08_802070	X	3157107	154905589	63763	0.0024
