Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	1	3208470	159542567	73688	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	1	159543799	159544371	2	-1.8343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	1	159544473	245880329	55199	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	2	474222	242124735	131123	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	3	526235	199023074	106234	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	4	1043934	163218259	89366	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	4	163218793	163219635	4	-1.4726
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	4	163219859	189836143	13221	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	5	967233	111139697	58434	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	5	111140893	111141654	2	-1.8175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	5	111142916	180293075	41924	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	6	959281	170745844	96335	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	7	671810	158077879	81233	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	8	607667	145304484	81423	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	9	779932	140058573	67939	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	10	405240	135075077	80742	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	11	446120	126957480	72793	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	11	126958190	126958393	2	-1.6362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	11	126963057	131225497	3020	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	11	131227828	131232056	3	-1.0767
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	11	131233267	133647740	1333	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	12	760163	9785428	4801	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	12	9785930	9787906	2	-2.6729
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	12	9788701	131671419	69044	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	13	18348806	36360010	11238	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	13	36360040	36362416	3	-1.6792
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	13	36363550	80573921	24691	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	13	80581104	80583293	5	-1.2458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	13	80586362	114005560	20618	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	14	19571208	48680214	14763	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	14	48681126	48686158	2	-1.6846
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	14	48690122	105059083	34615	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	15	21238778	99701830	44463	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	16	593460	87907437	40821	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	17	933971	47263913	20376	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	17	47264328	47265196	2	-1.4585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	17	47266621	78510305	16566	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	18	319586	21676577	10974	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	18	21676659	21682496	3	-1.1353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	18	21685359	44509748	14061	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	18	44510049	44510293	2	-1.4747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	18	44512434	75210228	17557	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	19	235018	63570038	23930	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	403764	12453923	7658	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	12453962	12454644	2	-3.1394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	12456046	29500601	9250	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	29504171	29512533	6	-0.7797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	29516566	43729263	8341	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	43729737	43736725	4	-1.0917
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	20	43736939	61690281	11970	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	21	14269492	25889235	7109	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	21	25890034	25891574	4	0.9694
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	21	25891652	46503202	13447	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	22	15803930	47717016	16914	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G09_801948	X	3167107	154558783	63719	0.0015
