Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	1	3208470	245880329	128949	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	2	474222	242124735	131176	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	526235	6880998	2207	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	6881622	6886400	6	-1.251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	6887613	34063639	16707	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	34063724	34066367	3	-1.7378
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	34066914	153863603	64456	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	153868438	153868666	4	-1.362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	153872447	158159278	2251	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	158161161	158166246	6	-1.4374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	3	158174102	199023074	20627	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	4	1043934	41835832	25238	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	4	41837526	41843459	3	-1.5103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	4	41844072	189836143	77374	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	5	967233	180293075	100393	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	6	959281	12302659	7955	-0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	6	12303136	12303625	3	-1.3448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	6	12304476	170745844	88411	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	7	671810	158077879	81250	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	8	607667	145304484	81455	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	9	779932	17313254	9914	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	9	17315122	17315654	3	-1.2756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	9	17315704	20413364	2503	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	9	20420468	20420925	2	-1.8289
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	9	20421056	140058573	55524	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	10	405240	135075077	80776	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	11	446120	2741933	713	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	11	2741967	2742118	2	-1.9458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	11	2742878	133647740	76480	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	12	760163	131671419	73868	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	13	18348806	114005560	56577	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	14	19571208	105059083	49391	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	15	21238778	99701830	44483	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	16	593460	87907437	40840	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	17	933971	78510305	36960	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	18	319586	75210228	42611	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	19	235018	63570038	23937	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	20	403764	50535608	29674	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	20	50539004	50544972	2	-1.6919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	20	50547379	61690281	7583	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	21	14269492	46503202	20563	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	22	15803930	47717016	16917	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_G12_801968	X	3167107	154558783	63379	0.0105
