Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	3208470	196741516	97150	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	196741719	196741758	2	-1.8079
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	196741797	245880329	31701	8e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	474222	9332433	5325	0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	9334108	9334785	2	-1.6719
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	9335725	171035082	85151	4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	171038244	171040744	6	-0.9306
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	171045675	242124735	40621	0.0026
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	3	526235	199023074	106218	0.0015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	1043934	64033512	34944	0.0018
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	64034934	64040205	4	-1.2698
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	64041948	189836143	67639	0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	967233	173998470	97430	0.0017
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	174002180	174013231	16	0.5055
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	174014730	180293075	2901	-0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	959281	42235660	24956	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	42236277	42237222	4	-1.1754
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	42239717	149192119	58683	0.0023
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	149193178	149194364	2	-1.8904
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	149195252	170745844	12692	0.0065
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	671810	30564122	16494	0.0067
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	30566761	30570316	3	-1.2211
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	30581033	43933755	8482	-0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	43934626	43937678	2	-2.0155
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	43938515	158077879	56237	0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	8	607667	145304484	81418	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	779932	90779260	37562	8e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	90781388	90781402	2	-1.9401
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	90781500	136481319	29050	-0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	136481421	136604016	79	0.5974
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	136604233	140058573	1211	0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	405240	33262874	22658	0.0043
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	33262996	33267386	2	-1.4212
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	33267483	35819180	1536	0.0126
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	35820916	35822743	2	-1.6307
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	35823062	135075077	56554	0.0039
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	446120	75642022	39778	-7e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	75645619	75645875	2	-1.6438
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	75647168	82891487	4592	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	82892722	82899830	2	-1.7556
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	82910180	133647740	32776	-0.0013
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	760163	84687618	46795	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	84689139	84690053	3	-1.4005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	84690178	131671419	27058	0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	18348806	87687997	39842	0.002
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	87690803	87733033	24	0.6226
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	87733996	98491768	6786	0.003
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	98492427	98494027	2	-2.0934
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	98494412	114005560	9902	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	14	19571208	105059083	49372	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	21238778	55392512	18032	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	55394165	55395596	2	-1.5134
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	55395953	64709017	6199	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	64709456	64710854	2	-1.5265
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	64713833	99701830	20217	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	593460	47193514	14802	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	47196064	47278455	40	0.5589
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	47278894	82351496	23338	-0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	82351498	82351507	2	-2.1066
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	82351525	86895309	2560	0.0104
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	86896110	86897749	2	-2.6027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	86907481	87907437	79	0.004
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	17	933971	78510305	36945	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	319586	9061675	4887	-0.0054
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	9063598	9133012	32	0.5535
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	9134357	75210228	37670	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	19	235018	63570038	23919	0.0031
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	20	403764	61690281	37240	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	21	14269492	46503202	20555	0.0034
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	22	15803930	47717016	16905	-0.0011
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	3167107	110183856	43326	0.0129
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	110183929	110183966	2	-4.3292
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	110184482	154558783	20242	0.005
