Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	3218610	198474893	97207	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	198475096	198475135	2	-1.8079
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	1	198475174	247813706	31699	8e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	484222	9414982	5324	0.0053
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	9416657	9417334	2	-1.6719
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	9418274	171326836	85142	4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	171329998	171332498	6	-0.9306
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	2	171337429	242476062	40623	0.0026
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	3	2212571	197538677	106212	0.0015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	1053934	64350917	34942	0.0018
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	64352339	64357610	4	-1.2698
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	4	64359353	188763651	67646	0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	914233	174065864	97429	0.0017
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	174069574	174080625	16	0.5055
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	5	174082124	180360469	2902	-0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	1014281	42127682	24957	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	42128299	42129244	4	-1.1754
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	42131739	149150426	58691	0.0023
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	149151485	149152671	2	-1.8904
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	6	149153559	170903919	12692	0.0065
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	705284	30597597	16495	0.0067
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	30600236	30603791	3	-1.2211
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	30614508	43967230	8482	-0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	43968101	43971153	2	-2.0155
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	7	43971990	158385118	56237	0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	8	617667	145232496	81425	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	789932	91589440	37569	8e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	91591568	91591582	2	-1.9401
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	91591680	137341498	29055	-0.0013
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	137341600	137464195	79	0.5974
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	9	137464412	140938752	1211	0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	415240	33222868	22658	0.0043
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	33222990	33227380	2	-1.4212
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	33227477	35779174	1536	0.0126
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	35780910	35782737	2	-1.6307
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	10	35783056	135225087	56552	0.0039
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	456120	75964374	39775	-7e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	75967971	75968227	2	-1.6438
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	75969520	83213839	4591	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	83215074	83222182	2	-1.7556
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	11	83232532	134142530	32770	-0.0013
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	889902	86163487	46791	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	86165008	86165922	3	-1.4005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	12	86166047	133161346	27057	0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	19450806	88889996	39838	0.002
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	88892802	88935032	24	0.6226
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	88935995	99693767	6786	0.003
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	99694426	99696026	2	-2.0934
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	13	99696411	114987458	9902	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	14	20501368	105988038	49370	0.0011
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	23687685	57605220	18033	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	57606873	57608304	2	-1.5134
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	57608661	66921963	6197	4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	66922402	66923800	2	-1.5265
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	15	66926779	101884307	20216	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	653459	48636013	14802	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	48638563	48720954	40	0.5589
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	48721393	83793995	23273	-0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	83793997	83794006	2	-2.1066
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	83794024	88337808	2560	0.0104
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	88338609	88340248	2	-2.6027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	16	88349980	89379936	79	0.004
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	17	987221	80917016	36945	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	329586	9071675	4889	-0.0054
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	9073598	9143012	32	0.5535
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	18	9144357	77109240	37665	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	19	284018	58878226	23919	0.0031
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	20	455764	62219837	37243	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	21	15347621	47678774	20554	0.0034
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	22	17423930	49331012	16904	-0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	3157107	110297200	43341	0.0129
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	110297273	110297310	2	-4.3292
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_C10_932358	X	110297826	154905589	20244	0.0049
