Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	3208470	60957511	31710	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	60957900	60957988	2	-1.8602
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	60961128	78817488	11114	-0.0037
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	78818198	78819612	2	-2.1708
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	78820018	156900391	29175	0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	156901685	156901932	3	-1.3109
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	156903488	245880329	56831	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	2	474222	242124735	131068	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	3	526235	199023074	106198	0.0015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	1043934	148712177	81145	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	148719626	148720484	4	-1.7437
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	148722748	164173475	8765	0.0021
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	164173911	164176880	11	-0.7354
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	164180785	183209159	10141	0.0038
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	183212068	183215855	7	-1.0053
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	183219023	189836143	2484	0.0061
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	967233	161557040	89140	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	161557461	161557940	2	-1.9551
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	161560876	180293075	11185	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	959281	38497676	22264	0.0063
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	38499784	38509679	4	-1.456
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	38510599	68113331	14630	0.0039
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	68114226	68118150	4	-1.4829
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	68123205	170745844	59411	0.0029
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	7	671810	158077879	81198	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	607667	91686333	49478	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	91688338	91688440	2	-2.5364
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	91689316	130191234	22891	9e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	130192294	130213708	14	-0.6064
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	130215739	145304484	9010	0.0113
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	9	779932	140058573	67911	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	10	405240	135075077	80729	0.0037
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	446120	80004345	42645	-3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	80005907	80006509	2	-2.0914
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	80007000	133647740	34507	2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	760163	73465688	39978	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	73472179	73472581	3	-1.34
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	73473967	114459503	25051	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	114459718	114465160	5	-1.4182
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	114465290	131671419	8789	0.0098
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	18348806	22656377	2172	0.005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	22658819	22663273	12	-1.1376
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	22664862	62451647	23398	-0.0049
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	62452052	62452064	2	-1.8198
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	62454792	92116849	16895	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	92117688	92117714	2	-1.9136
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	92117738	114005560	14055	0.0045
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	14	19571208	105059083	49361	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	15	21238778	99701830	44443	2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	593460	77111140	33693	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	77111434	77115270	2	-1.5728
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	77117235	87907437	7112	0.0046
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	933971	36758119	15998	0.0041
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	36780086	36780790	6	0.9795
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	36780841	78510305	20930	0.006
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	319586	7013705	3335	0.0079
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	7013733	7013748	2	-1.5493
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	7015506	41647592	19788	-0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	41647850	41679537	18	0.6842
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	41682494	69561091	15809	0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	69561204	69561420	2	-1.8421
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	69561465	75210228	3627	0.0089
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	235018	13743201	4894	0.0038
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	13743757	13749347	3	-1.9252
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	13749486	63570038	19007	-0.0043
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	20	403764	61690281	37230	0.0037
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	14269492	16846405	1574	0.0055
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	16847242	16849886	4	-1.3341
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	16850037	19092890	1380	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	19093455	19099254	6	-1.15
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	19099736	46503202	17582	0.005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	22	15803930	47717016	16900	0.0066
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	3167107	43887843	18230	0.023
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	43891195	43891344	2	-4.3102
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	43892069	154558783	45207	0.0112
