Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	3218610	61184923	31707	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	61185312	61185400	2	-1.8602
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	61188540	79044900	11179	-0.0036
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	79045610	79047024	2	-2.1708
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	79047430	158633767	29172	0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	158635061	158635308	3	-1.3109
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	1	158636864	247813706	56828	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	2	484222	242476062	131060	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	3	2212571	197538677	106192	0.0015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	1053934	148492727	81150	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	148500176	148501034	4	-1.7437
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	148503298	163954025	8765	0.0021
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	163954461	163957430	11	-0.7354
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	163961335	182972165	10142	0.0038
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	182975074	182978861	7	-1.0053
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	4	182982029	188763651	2483	0.006
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	914233	161624462	89137	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	161624883	161625362	2	-1.9551
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	5	161628298	180360469	11188	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	1014281	38389698	22265	0.0063
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	38391806	38401701	4	-1.456
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	38402621	68056610	14632	0.0039
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	68057505	68061429	4	-1.4829
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	6	68066484	170903919	59417	0.0029
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	7	705284	158385118	81199	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	617667	91617157	49481	3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	91619162	91619264	2	-2.5364
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	91620140	130122052	22895	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	130123112	130144526	14	-0.6064
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	8	130146557	145232496	9010	0.0113
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	9	789932	140938752	67923	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	10	415240	135225087	80727	0.0037
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	456120	80326697	42642	-3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	80328259	80328861	2	-2.0914
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	11	80329352	134142530	34500	2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	889902	75179421	39973	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	75185912	75186314	3	-1.34
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	75187700	115975120	25052	2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	115975335	115980777	5	-1.4182
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	12	115980907	133161346	8788	0.0098
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	19450806	23758377	2172	0.005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	23760819	23765273	12	-1.1376
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	23766862	63553646	23395	-0.0049
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	63554051	63554063	2	-1.8198
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	63556791	93318848	16894	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	93319687	93319713	2	-1.9136
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	13	93319737	114987458	14055	0.0045
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	14	20501368	105988038	49359	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	15	23687685	101884307	44441	2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	653459	78553639	33627	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	78553933	78557769	2	-1.5728
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	16	78559734	89379936	7112	0.0046
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	987221	39504593	15996	0.0041
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	39526560	39527264	6	0.9795
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	17	39527315	80917016	20932	0.006
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	329586	7023705	3337	0.0079
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	7023733	7023748	2	-1.5493
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	7025506	43393594	19786	-0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	43393852	43425539	18	0.6842
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	43428496	71410111	15806	0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	71410224	71410440	2	-1.8421
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	18	71410485	77109240	3627	0.0089
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	284018	13882201	4894	0.0038
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	13882757	13888347	3	-1.9252
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	19	13888486	58878226	19007	-0.0041
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	20	455764	62219837	37233	0.0037
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	15347621	17924534	1574	0.0055
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	17925371	17928015	4	-1.3341
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	17928166	20171019	1380	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	20171584	20177383	6	-1.15
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	21	20177865	47678774	17581	0.005
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	22	17423930	49331012	16899	0.0066
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	3157107	44002899	18231	0.0231
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	44006251	44006400	2	-4.3102
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_E09_932380	X	44007125	154905589	45223	0.0113
