Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	51598	52118653	28587	-0.0032
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	52120937	52121441	5	-1.1645
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	52123438	72541086	14330	-4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	72541504	72583721	45	-1.2115
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	72583736	110034560	23708	5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	110034576	110041701	15	-1.0261
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	110044476	112491849	1956	0.0058
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	112497488	112498711	20	-0.4407
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	112498721	147177801	6364	-0.0045
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	147182684	147557399	148	-0.6664
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	147558223	147653583	17	-0.1589
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	147654217	147703466	8	-0.8231
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	147788464	150822330	1493	-0.0076
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	150822391	150853200	33	-1.1949
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	150853218	157226199	3889	0.003
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	157228663	157229420	2	-1.6103
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	157233488	159775499	1585	0.0093
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	159780383	159884655	22	0.3667
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	159884875	159885315	3	-0.4273
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	159885444	159904825	21	0.4614
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	159905104	192714857	22748	-4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	192718034	192721641	2	1.8209
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	192723639	193491693	479	0.0202
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	193492497	193563750	46	0.2942
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	193564886	194981496	926	-3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	194994473	195152308	152	-0.8658
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	1	195153332	247191011	35851	0.0021
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	2784	4183562	2990	-0.0283
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	4191739	4201042	36	-0.6738
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	4201387	34562154	21068	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	34564232	34580200	31	-0.3323
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	34580521	52608369	13043	0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	52608385	52635046	34	0.6388
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	52641453	81410506	18782	-7e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	81411039	81411351	2	-2.5913
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	81412587	114078485	14721	-0.003
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	114078884	114097291	3	-1.8004
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	114100022	129354548	9598	0.0051
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	129354948	129356767	14	-0.8276
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	129356785	209364388	48299	0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	209364515	209366015	2	-1.8624
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	2	209368808	242738129	21286	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	35345	6621543	5833	0.0085
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	6626128	6628332	23	-0.8322
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	6630078	47453513	27659	0.0051
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	47466826	47467724	2	-2.5374
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	47472218	65163493	11815	0.0058
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	65164275	65185492	53	-0.7117
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	65191389	75651239	7374	0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	75655239	75669495	6	-2.2682
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	75677871	84782448	4993	0.0097
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	84782483	84785153	17	-0.5822
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	84785290	96938796	4134	0.0163
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	96949570	96950800	2	-2.7888
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	96951370	142025229	27403	0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	142028391	142029674	2	-3.2699
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	142043308	146961813	3025	0.0023
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	146961925	146962252	2	-2.1299
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	146963455	163990886	10503	0.0085
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	163990962	164106536	66	-0.2772
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	164106547	190843448	16677	0.0097
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	190846372	190853682	12	-0.8808
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	190853708	191861817	773	-0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	191866289	191881079	3	-1.2733
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	191885419	194360596	1720	0.0104
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	194360656	194365597	19	-1.2211
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	194369129	196767187	1486	0.0119
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	196868323	196932593	28	-0.4528
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	196941179	197145947	99	0.0196
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	197175243	197203162	7	-0.7988
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	3	197209701	199380515	1083	0.0098
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	2281	9823258	5798	-0.0155
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	9832514	9840596	28	-2.2233
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	9843312	34441990	16972	0.0046
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	34442092	34506267	50	0.4335
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	34506308	48962605	8976	-0.0015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	48985949	48986112	2	-2.2335
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	48991977	64390176	7623	0.0011
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	64390200	64390724	4	1.0727
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	64390803	69049737	2875	0.0033
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	69054598	69512426	80	-0.2366
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	69571393	86862881	10559	0.0023
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	86862932	86863126	2	1.8129
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	86863154	92288927	3401	0.0076
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	92293065	92299640	7	-1.0101
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	92300588	115394772	13733	0.0054
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	115394793	115401624	22	0.5535
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	115403678	153009236	22135	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	153010983	153012341	13	-0.8391
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	153014246	153014309	3	0.9996
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	153014838	153209050	184	-0.004
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	153209736	153213640	7	-0.9183
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	153215732	162099574	5676	-6e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	162099591	162104050	18	0.5076
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	162104358	172605921	6676	0.0049
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	172611459	172614019	8	1.513
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	172614033	189458252	11349	0.006
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	189458354	189458369	2	-2.4563
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	4	189458418	191261904	1179	0.0217
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	68532	738748	308	-0.024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	751371	886628	58	0.3649
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	905566	12853889	9844	0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	12868780	12873076	9	-1.8185
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	12877411	12891533	5	-0.7902
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	12902201	27560209	9095	0.008
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	27561147	27561712	7	-0.9992
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	27561727	68882059	23872	0.0033
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	68903050	69153891	5	-1.26
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	69269183	177131055	67811	0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	177160157	177192936	6	-1.1218
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	177198586	180307129	1810	-0.0044
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	180311316	180335449	9	-0.8963
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	5	180339164	180722926	181	-0.0549
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	94661	199267	100	-0.0227
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	199283	326149	101	0.2489
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	327559	26840385	20067	0.0038
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	26845011	26862372	14	-0.6962
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	26863894	26870617	5	0.1195
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	26871060	26873047	4	-1.2531
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	26874419	29958359	1456	-0.0054
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	29979615	30024465	24	-0.6978
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	30024484	31394284	647	-0.0245
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	31394510	31404430	9	-1.2762
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	31417903	32626747	530	-0.0306
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	32635262	32678343	11	-0.8755
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	32681749	32732282	28	-0.006
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	32732569	32758590	6	-1.1349
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	32762618	54039110	13736	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	54039189	54039814	6	-1.1245
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	54043307	69743350	7357	0.0118
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	69744419	69744504	2	-1.7081
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	69747691	74648586	3147	-0.0039
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	74648953	74654069	9	1.2772
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	74658138	77071668	1466	-0.0024
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	77073620	77073646	3	-1.4837
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	77073713	77345180	185	-0.0054
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	77345453	77346030	3	-0.9884
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	77347307	103844669	16697	0.0085
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	103844732	103868754	45	-1.2996
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	6	103872163	170892930	44193	0.0022
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	52911	3576829	1625	-0.0174
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	3576860	3581326	27	-1.1227
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	3584536	54347867	36894	0.0048
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	54353999	54354011	6	-2.1787
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	54360982	97223906	22135	0.0017
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	97233396	97242213	18	-0.6165
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	97242264	109224905	6635	-0.0017
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	109224909	109224911	2	-1.6474
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	109224913	125832210	10052	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	125832718	125834112	13	0.7711
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	125834113	133435735	4696	0.0043
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	133435751	133437627	14	0.7555
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	133437686	134856108	1063	0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	134864208	134867347	6	-0.801
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	134868333	142154515	4638	0.0034
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	142156294	142165614	27	0.6513
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	7	142165684	158819765	10577	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	21254	25030393	21825	0.0094
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	25030439	25040167	24	0.4954
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	25040250	58080498	18152	0.002
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	58082033	58091757	7	-1.1481
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	58100405	112364214	32941	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	112364257	112364436	4	-2.3328
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	112369457	129825448	11652	0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	129832317	129833267	2	-2.295
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	129846636	145623814	10978	-0.0064
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	145636324	145653530	12	-0.6326
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	8	145653951	146268959	266	-0.0435
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	36587	23351805	20433	0.0076
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	23353115	23363484	8	-2.4851
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	23368488	41465980	10838	0.0103
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	41469883	41590382	4	-1.1602
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	41590614	44195882	134	0.0301
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	44199159	44325975	8	-0.7524
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	44336695	44569219	7	0.2617
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	44667855	44795733	36	-1.3942
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	44806024	137351189	47256	0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	137353926	137359537	12	-0.7275
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	9	137359564	140211215	1102	-0.0314
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	62809	17934982	14867	0
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	17967560	17989863	3	1.5185
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	18011822	18213969	13	-0.2165
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	18225129	18239819	3	-1.5972
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	18263653	34000844	11221	4e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	34003028	34003159	2	-2.5871
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	34006127	124324003	56987	0
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	124331524	124341003	8	-1.1584
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	10	124346802	135356694	7911	-5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	188510	4924226	2476	-0.0181
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	4924693	4932833	30	-1.5758
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	4932848	4933658	15	-0.5288
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	4934958	5740499	780	0.0105
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	5743981	5765715	33	-0.7375
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	5765914	17333242	8354	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	17337138	17337504	2	-1.5187
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	17337608	18897446	1062	-0.0071
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	18905648	18916691	36	0.569
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	18917326	50725893	21457	0.0047
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	50952948	50983680	3	-1.2973
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	51019825	54476600	146	0.0452
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	54477399	54514867	2	1.4127
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	54530469	55130624	237	0.0352
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	55130764	55209585	57	0.2844
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	55210152	79645152	13285	-0.0022
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	79645161	79645212	3	-2.4476
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	11	79645334	134449982	39098	-3e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	20703	2106150	1263	-0.0084
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	2116123	2128365	43	-0.7831
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	2128667	27537259	17350	0.0013
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	27539008	27542629	28	-0.8411
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	27548428	33185927	4171	0.0018
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	33192673	33198641	27	0.6388
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	33199627	44186092	5617	0.0057
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	44190705	44195804	4	-2.2653
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	44199559	51129193	3887	1e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	51132219	51150865	17	-1.1097
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	51153981	53692096	1527	-0.0112
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	53692230	53694762	2	1.3319
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	53695159	62398390	5274	-0.0012
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	62403535	62429455	11	-0.6983
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	12	62431572	132288262	45789	7e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	17924949	22527187	2895	-0.0047
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	22527210	22531515	13	-2.1376
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	22536195	36969135	10654	0.0034
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	36970036	36982732	15	0.5139
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	36982757	71374989	21559	0.0081
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	71375556	71378557	4	1.2702
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	71378606	73860797	1877	-0.002
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	73862118	73863182	2	-1.8231
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	73864446	82685964	5805	5e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	82686034	82690215	12	-0.5182
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	82690809	94797015	7779	0.001
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	94797159	94798750	3	-1.4307
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	13	94798997	114126499	13632	0.0019
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	18072124	59647826	25818	0.0051
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	59648794	59649150	5	-0.9736
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	59656739	73065527	8479	0.0025
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	73070876	73099653	10	-1.2678
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	73099668	105531947	20770	-8e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	105550720	105553341	4	-1.5268
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	105558085	106247258	377	0.0327
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	106248976	106249617	4	-0.8617
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	106249648	106313435	50	0.0263
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	106317891	106335061	9	0.6996
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	14	106340497	106356482	13	-0.2413
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	15	18276341	18846002	106	-0.027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	15	18846104	19566875	200	0.2411
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	15	19764921	24111285	2495	-0.0049
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	15	24113245	24114249	2	-3.8662
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	15	24114681	100286563	49207	0
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	777	1006397	385	-0.0782
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	1006398	1032872	7	-0.9627
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	1049436	14956361	10740	-0.0028
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	14956404	14957159	5	-0.9258
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	14957386	15032942	56	-0.3106
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	15034391	18686949	1645	-0.0177
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	18687279	18700211	7	-0.7731
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	18704090	29244628	6319	-0.002
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	29245159	29246028	2	-1.9196
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	29250102	32031832	917	-0.0303
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	32054387	32562740	97	0.2569
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	32562796	33009105	53	-0.0202
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	33149454	33618281	102	0.2417
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	33624457	34317210	200	-0.0745
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	34324072	34374420	25	0.8822
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	34374425	34374427	3	-0.2213
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	34374807	34613067	140	0.854
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	34614572	54352715	6604	-0.0052
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	54353890	54379945	22	-0.9876
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	54387058	88539562	25047	-0.0046
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	88540428	88548362	2	-1.8566
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	16	88550960	88815036	96	-0.1084
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	526	8183635	4544	-0.0151
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	8188272	8188458	2	-2.1253
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	8190183	18296117	6885	7e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	18299671	18405946	28	-1.603
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	18409922	31460645	6918	-0.0077
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	31460821	31559764	40	0.3868
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	31567456	52638331	11938	-0.0077
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	52642870	52659175	21	-1.0337
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	52662641	53042488	301	0.015
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	53043332	53043992	2	-1.5394
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	53046992	72471154	11464	-0.0065
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	72483498	72483549	2	-1.6361
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	17	72486773	78643088	3122	-0.0092
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	18	1543	63104629	41168	0.0027
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	18	63110187	63118934	23	-0.74
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	18	63119014	76116029	9572	0.0064
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	41910	12553001	5070	-0.0066
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	12558366	12559102	2	-1.7636
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	12561523	20386516	3906	-0.0029
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	20388046	20513074	72	-0.8431
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	20513302	46044497	10576	-0.0045
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	46044577	46072786	32	-0.6889
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	46083995	60136986	7428	-0.0071
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	60137100	60139110	2	1.4682
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	19	60139181	63789666	2239	-0.0045
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	9305	1508999	1204	-0.0214
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	1509580	1541893	41	-0.7184
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	1545946	41411547	26247	0.004
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	41412384	41414531	3	-1.2689
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	41417837	52115017	7553	0.0042
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	52115237	52115335	5	-1.5234
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	20	52115665	62426597	7406	-0.0035
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	21	9758742	46921385	24385	-0.0017
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	14432528	17112919	1216	-0.0137
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	17128440	17128454	2	-1.9036
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	17150421	22618367	3375	-0.0566
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	22618434	22662933	25	0.4322
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	22667307	37620866	10843	-2e-04
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	37625201	37626850	3	-2.6316
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	37629060	41240713	1960	-0.0062
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	41243013	41296643	24	0.6579
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	22	41303145	49581321	6089	-0.0181
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	X	108477	154835548	84529	0.0016
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	2710438	5999989	771	-2.5596
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	6003672	6030099	13	-4.0339
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	6031016	6161425	55	-2.7008
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	6167901	6387325	99	-3.8565
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	6387861	18080026	4681	-3.1087
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	18080874	19547685	705	-3.6074
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	19547873	22924247	1243	-3.167
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	22925190	24599413	315	-3.7092
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	24602438	25040317	97	-3.0736
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	25040616	25684358	82	-4.1571
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	25707759	25938472	37	-2.8128
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	25944418	26018676	26	-3.8789
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	26019358	26127308	29	-2.4714
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	26127580	26687080	198	-3.7135
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	26699115	26731407	13	-5.2951
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	26731471	26866725	51	-3.5169
TRIAL_p_TCGA_191_193_SNP_N_GenomeWideSNP_6_F09_932354	Y	26868036	57427647	174	-2.7246
