Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	61735	86341	15	0.6053
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	98588	16820619	8688	-0.0101
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	16828502	16970456	50	-0.3741
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	17005734	17016880	20	0.0667
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	17017078	17217480	52	-0.3259
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	17217907	72768916	34102	-0.0036
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	72768936	72779080	7	-1.3185
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	72779091	72811148	31	-0.3567
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	72811904	108729759	22901	0.0043
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	108734235	108734877	2	-3.5985
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	108737496	110226378	716	-0.004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	110226487	110242953	25	-0.8258
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	110244998	147829226	8268	-0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	147831183	147844790	2	1.8784
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	147929336	152555706	1711	0.0181
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	152555767	152586540	32	1.389
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	152586576	174796405	15025	0.0069
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	174796556	174797610	13	-0.8531
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	174797687	182536673	5265	0.0078
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	182537220	182537796	4	-1.5493
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	182538582	196758120	9359	0.0243
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	196758149	196759288	4	-1.3326
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	196761820	196790958	27	0.1208
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	196791026	196798823	8	0.7894
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	196799159	214637808	11893	0.0087
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	214638436	214638457	2	-3.3704
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	214639253	248737447	23775	0.0098
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	248749194	248825137	40	-0.4717
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	1	248825263	249224388	138	0.023
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	12784	34701583	24042	-0.0019
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	34701625	34723203	32	0.4591
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	34723301	49522898	10733	-0.0015
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	49533042	49541190	6	-1.1651
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	49545041	52764813	2298	0.0188
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	52765392	52781542	20	-0.4279
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	52787949	86937687	21859	7e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	86953070	86953854	2	-2.3908
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	86970406	87821184	238	0.0055
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	87822183	87827978	2	-1.8456
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	87839297	97857927	1856	-0.0169
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	97865337	97877173	15	-0.7041
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	97886334	98118212	24	-0.0075
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	98140747	98162189	9	0.9496
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	98166878	146862085	29445	1e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	146864404	146866934	22	-1.5696
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	146877806	163684710	9975	0.0068
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	163689147	163689398	2	-2.2263
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	2	163696185	243089456	48961	0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	60345	11110808	9380	0.0026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	11111571	11115921	2	-1.4925
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	11118659	13122728	1415	0.0116
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	13127742	13128430	3	-1.5457
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	13130096	13330721	176	-0.0304
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	13330746	13339357	10	-0.8515
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	13340010	31502960	12552	0.0017
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	31503032	31503720	4	-2.0195
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	31504956	47395601	9890	0.0041
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	47399911	47400331	2	1.4806
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	47405305	68746164	14298	-0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	68746259	68747413	13	-0.9361
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	68748758	89066588	12319	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	89067144	89070260	3	-1.3225
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	89075825	129786286	22327	0.0068
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	129786374	129798781	39	0.394
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	129799013	140542539	6729	-0.0088
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	140545701	140546984	2	-2.4874
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	140560618	162508268	13492	0.0094
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	162512657	162628614	73	-1.449
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	162628643	192874747	19116	0.0077
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	192877902	192882903	20	-1.1516
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	192886435	195400799	1489	0.0036
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	195409946	195482370	48	0.3225
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	3	195495233	197896118	1165	0
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	12281	10210390	5793	-0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	10214160	10231498	24	1.8097
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	10234214	10390715	178	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	10392354	10402718	17	-0.5729
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	10402746	21372003	8005	0.0017
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	21372039	21376851	14	-0.7712
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	21383740	23970627	1812	0.0061
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	23971604	23974495	3	-1.0094
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	23977708	26478787	1819	-0.0063
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	26480158	26487548	6	-0.9667
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	26491768	34778975	5098	0.0166
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	34779004	34824725	42	0.5935
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	34829872	49267848	8957	0.0042
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	49291192	49291355	2	-1.883
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	49297220	69372003	10469	0.0078
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	69374941	69485979	65	-1.4855
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	69489335	125459405	33751	0.0023
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	125460351	125462935	3	-2.3458
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	125463025	152789786	15986	0.004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	152791533	152792567	12	-0.9912
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	152792891	161880141	5867	0.0062
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	161880197	161880906	8	-0.8139
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	161881102	172987928	7063	0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	172989148	172989533	12	0.8615
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	4	172995979	191027923	12086	0.0104
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	15532	21449219	15736	-0.0036
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	21449276	21451998	5	-2.551
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	21452438	34259509	7955	-0.0025
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	34264347	34264541	2	-2.1856
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	34264555	46191884	7008	0.0026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	46195883	46199435	4	-1.2613
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	46209299	46251306	13	0.1004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	46271008	46273502	8	1.0363
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	46278212	57321646	5072	0.0021
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	57326027	57333533	31	2.1558
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	57338357	103851221	26788	-0.0018
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	103860373	103860604	4	-1.3764
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	103861049	106518969	1602	-0.0021
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	106519119	106519216	3	-1.2123
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	106519587	126169862	13545	0.0084
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	126182258	126184113	2	1.7541
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	126188516	177198449	33037	-0.0011
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	177227551	177232605	3	2.646
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	177254965	180193199	1706	0.0052
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	180193779	180194185	2	-1.7694
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	180194609	180374523	102	-0.0373
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	180378710	180446390	28	0.3875
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	5	180448183	180790320	162	-0.0669
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	149661	303017	126	-0.0205
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	303121	384109	79	-0.4175
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	384521	29849267	21509	9e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	29850196	29850274	2	-2.4241
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	29850366	29916855	29	0.109
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	29917146	29918587	5	-1.6746
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	29921074	31280823	634	-0.0308
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	31286276	31296451	10	0.9368
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	31309924	53931151	14281	-0.0115
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	53931230	53931419	4	2.0893
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	53931855	67038046	5477	0.0069
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	67040913	67042897	6	-2.6278
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	67043192	79026972	7862	0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	79027128	79027359	4	1.122
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	79027515	103734829	15449	0.0037
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	103737976	103762061	45	-1.2273
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	6	103765470	171051005	44131	0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	43355	148300	90	-0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	155066	158626	10	-0.7187
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	161442	21966119	15547	0.0092
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	21973207	21979517	3	-2.074
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	21980773	28098906	4435	0.0096
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	28099261	28099441	2	-1.846
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	28102473	54380373	18374	0.0093
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	54386505	54386517	6	1.3129
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	54393488	64594341	3135	0.0015
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	64594929	64595698	4	1.4243
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	64637128	68394435	1922	0.0102
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	68395264	68395409	2	-1.7155
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	68396288	68398179	4	-4.859
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	68399377	70420438	1221	-8e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	70423250	70426141	2	-2.5158
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	70428243	126044974	32486	0.0065
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	126045556	126046877	13	1.3013
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	126046878	126275822	149	-0.0379
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	126277032	126278361	2	-2.6951
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	126278808	141786850	9793	0.0017
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	141787130	141792107	17	0.4895
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	141795281	142476719	448	0.0462
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	142476764	142486045	26	-2.0788
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	7	142486115	159127004	10556	5e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	31254	593041	327	0.0186
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	594944	595908	10	1.2163
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	601043	7238019	7499	0.005
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	7250380	7787962	146	0.7007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	7798758	7866162	29	-0.0246
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	7935855	8018038	38	0.3102
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	8054344	11934660	3221	-0.0028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	11949551	12189243	13	0.9858
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	12198121	12247486	43	0.01
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	12260927	12443055	64	0.4865
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	12473543	23402308	9250	-1e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	23407740	23407871	5	-0.9024
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	23407905	24974476	1137	-0.0015
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	24974522	24984333	25	-2.3961
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	24991104	39352622	9043	-0.0031
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	39352687	39356389	2	-1.7703
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	39356721	51032011	4606	0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	51032024	51032387	7	-2.2176
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	51033423	72215311	13277	0.0097
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	72215364	72216434	6	-2.2718
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	72216501	129756266	35696	0.0065
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	129763135	129764085	2	-2.6257
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	129777454	144705157	10733	-9e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	144705197	144707021	7	-1.4775
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	8	144718989	146298155	502	8e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	46587	602903	511	-0.0169
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	606699	606844	2	1.6752
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	606893	6990926	6089	0.0043
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	6993701	6993827	3	-1.1702
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	6993848	18355044	9951	0.0093
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	18356959	18365085	10	-0.6496
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	18365091	23361805	3817	0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	23363115	23373484	8	-2.2272
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	23378488	29969868	4946	0.0083
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	29969969	29970411	2	1.8081
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	29972111	32100704	1455	0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	32104280	32121628	45	-0.7959
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	32127551	38989378	4235	0
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	38994130	38996237	3	-2.2211
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	38996748	43187967	176	-0.0214
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	43315670	43790346	39	-0.5062
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	43800186	44241817	29	0.0255
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	44243434	44273241	13	0.9026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	44385979	68183981	196	-0.0486
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	68186051	68216415	11	1.2563
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	9	68216489	141091394	48097	6e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	72809	67300074	44597	0.0011
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	67305069	67331499	44	0.4114
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	67332872	91998512	16599	0.0018
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	91998574	92001719	2	-1.8884
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	92002112	92459927	310	-0.0079
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	92462715	92463291	3	-3.4377
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	92471580	124332296	21348	-0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	124334013	124356812	10	-0.7408
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	10	124357726	135506704	7898	-0.0085
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	11	198510	5789601	3297	-0.0151
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	11	5789725	5809139	29	-0.6318
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	11	5809338	101594384	59805	-0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	11	101597860	101597964	4	1.8474
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	11	101598212	134944770	23708	0.0026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	150442	9630556	6185	-0.004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	9633870	9734970	27	1.0784
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	9735686	11511578	1178	0.0123
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	11512492	11543406	30	0.5836
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	11552192	33386757	15429	0.0028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	33388829	33395142	4	-3.5851
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	12	33395418	133778189	61902	0.0019
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	13	19026949	58584790	26465	0.006
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	13	58590281	58597030	6	-0.9995
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	13	58602052	115108397	37561	0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	19002124	19660853	47	-0.1239
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	19689317	19693249	3	-2.0376
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	19697885	42855165	14497	0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	42855466	42855717	3	-1.4769
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	42856976	43786550	563	0.002
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	43788084	43794611	4	-1.0453
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	43798890	73995774	19076	-3e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	74001123	74029900	10	0.8948
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	74029915	106535295	20753	-0.0029
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	106538062	106551572	9	0.9226
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	106553186	106715489	71	0.0068
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	106717356	106727469	8	0.8282
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	106728162	107276949	334	-0.0134
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	14	107277354	107285437	8	-0.2877
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	20016328	24669745	1420	-0.0846
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	24674751	24713023	29	-0.4445
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	24713425	27223811	1794	0.0064
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	27224321	27227700	4	-1.7472
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	27228346	98508971	45722	0.0013
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	98509207	98510500	2	2.4283
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	15	98513845	102469040	2907	-0.0055
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	60777	18198717	12772	-0.0107
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	18228118	18238289	2	-2.065
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	18242726	18742110	35	0.1376
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	18743062	18748576	2	-1.9844
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	18761093	32640972	7332	0.0011
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	32642429	32907440	44	-0.3165
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	32915513	33056748	14	0.1671
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	33097422	33776085	112	-0.4544
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	33794655	55784826	6940	-0.0103
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	55789570	55816705	25	-0.4327
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	55821969	58942985	1897	-3e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	58947475	58948231	3	-2.0722
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	58955655	78373337	12492	-3e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	78373764	78384765	13	0.7695
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	16	78385001	90287535	10613	-0.0178
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	526	18319862	11420	0.0014
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	18355392	18412558	18	0.6031
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	18426461	39423057	9494	0
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	39423077	39423090	2	2.2205
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	39423103	44153522	2515	-0.0099
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	44156081	44165803	9	0.265
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	44166270	44394420	126	-0.2547
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	44401067	44505241	10	0.2637
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	44523711	44523726	2	2.6878
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	17	44546329	81049726	21603	-0.0023
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	18	11543	64953649	41055	5e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	18	64959207	64967265	21	-0.9374
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	18	64967718	69131983	3049	0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	18	69132080	69133829	4	-2.1066
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	18	69134205	78015057	6509	0.006
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	90910	8334939	2931	0.002
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	8350197	8352027	8	1.0952
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	8365042	43156999	17546	8e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	43162607	43224562	30	0.4252
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	43228137	43697333	209	-0.0415
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	43703033	43756237	22	-2.2439
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	43766659	52131813	4161	-0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	52142615	52148197	10	-2.8802
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	52154905	53316340	789	0.0111
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	53319104	53319159	2	-1.6748
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	53327390	56269096	1730	0.0072
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	56271763	56286293	10	0.912
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	19	56288941	59097854	1848	-0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	61305	61311	6	0.7839
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	61312	1560562	1189	-0.0103
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	1560787	1560951	4	0.4208
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	1560999	1590534	37	1.6531
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	1593849	45776986	28821	-0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	45780106	45789953	13	-0.5917
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	45790749	52681610	4910	0.0024
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	52681830	52681928	5	-1.7192
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	20	52682258	62956153	7400	-0.0071
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	21	10736871	23651134	6436	0.0111
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	21	23655900	23666999	10	-0.8301
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	21	23669292	48096957	17868	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	16052528	24344422	4613	-0.0256
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	24350529	24370430	9	-0.863
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	24371070	24385546	4	-2.6734
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	24386631	24396814	6	-0.7294
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	24401529	25682780	831	-0.0135
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	25684408	25692741	5	1.0153
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	25700334	39363619	10022	-0.0113
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	39363684	39371902	20	-0.5306
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	39374377	42897282	1894	-0.0065
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	42899440	42955431	25	0.4262
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	42955788	50967032	5950	-0.0235
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	50973108	50973116	5	-1.0774
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	22	50973754	51234455	147	-0.0467
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	X	168477	155182354	84319	0.0026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	2650438	5944603	795	-2.6606
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	5948100	15590276	2756	-3.1634
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	15590342	15594523	3	-7.6439
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	15594889	19571480	2072	-3.2192
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	19574890	21024613	669	-3.6687
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	21025062	24573282	1296	-3.1976
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	24573822	26218232	292	-3.6801
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	26222820	26473956	72	-2.9915
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	26482088	27240184	96	-4.0151
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	27254679	27720551	98	-2.9055
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	27721084	28423938	251	-3.7618
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	28438116	28661292	104	-2.9807
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E09_1270694	Y	28661650	59018259	74	-2.645
