Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	61735	98588	16	-0.5662
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	98602	356542	13	0.6411
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	404171	72750353	42889	0.0072
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	72756113	72763370	9	-1.1141
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	72768418	72811148	41	1.9756
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	72811904	75097785	1359	0.0112
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	75098969	75099977	2	-2.038
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	75099988	104225568	18662	-0.0013
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	104239689	104303403	14	0.7753
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	104303501	106013376	914	-0.0176
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	106019205	106022375	17	0.7509
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	106024055	152555767	12654	0.008
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	152555795	152586117	28	-1.3443
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	152586238	152759678	176	-0.0064
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	152761923	152768700	37	-2.0919
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	152773905	174796405	14816	0.002
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	174796556	174801840	16	-0.6109
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	174801854	190875302	10750	0.0039
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	190875644	190876009	2	-1.8762
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	190876103	196812507	3929	0.0049
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	196812530	196815791	2	-2.7482
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	196816730	210071062	8780	0.0037
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	210081613	210093571	6	-1.1123
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	210093649	215855994	3878	-0.0124
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	215859709	215862105	13	-0.9945
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	1	215866009	249224388	23151	0.0029
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	12784	1119052	760	0.0052
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	1119227	1119420	2	-1.6645
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	1121378	17674793	12397	0.0053
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	17675735	17675959	2	-1.8319
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	17678048	34691069	10882	0.0018
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	34699315	34737057	45	-2.1165
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	34737163	35968036	873	-0.015
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	35977790	35987916	6	-1.9945
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	35987947	52741737	12126	-0.0077
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	52743925	52781542	41	0.5962
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	52787949	155952091	58959	-6e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	155952670	155952929	2	-2.369
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	155956409	180418211	14970	-0.0041
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	180418333	180421888	26	-0.8142
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	2	180421906	243089456	38466	-0.0017
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	60345	2968640	2539	-0.028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	2969059	2973039	5	-1.4187
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	2975082	6646543	3273	-0.0043
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	6651128	6653332	23	-0.6117
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	6655078	8821804	1883	0.0019
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	8825367	8858201	28	0.5198
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	8866808	46793377	25397	0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	46801817	46849179	39	-0.7708
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	46849589	68746164	14537	-9e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	68746259	68747329	11	-0.8977
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	68747364	84699793	9914	0.0024
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	84699871	84702136	12	-0.739
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	84702161	128394505	24080	9e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	128395490	128412331	10	0.6703
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	128414161	129746627	614	-0.01
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	129747156	129851863	84	0.388
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	129856480	137027960	4461	0.0046
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	137027962	137027963	2	2.347
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	137030829	162512739	15735	-0.0016
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	162513092	162626572	69	0.8564
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	162626603	178936351	10068	7e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	178936529	178936584	2	-1.7402
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	178936623	186406138	4337	0.0021
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	186412861	186417771	11	-0.78
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	186421870	192877962	4703	-0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	192878045	192879006	5	1.6132
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	3	192880473	197896118	2716	0.0201
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	12281	10210390	5792	0.0165
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	10214160	10231498	24	2.7377
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	10234214	10235268	7	0.8605
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	10236142	10390715	171	0.0083
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	10392354	10400156	14	-0.7429
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	10400511	34779004	16758	-4e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	34779025	34829872	42	0.4746
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	34829913	69372003	19426	2e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	69374941	69485979	65	-1.5653
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	69489335	70137957	338	-0.0214
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	70138038	70236151	47	-0.6289
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	70239096	138092239	40485	0.002
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	138092420	138093414	14	-3.3462
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	138094958	153684334	9419	0.0067
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	153684358	153684617	3	1.3564
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	153686275	161873940	5304	0.0028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	161874000	161884908	22	-0.6046
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	161884919	172368531	6648	0.0031
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	172369346	172377724	12	-0.6239
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	172380371	172987928	392	0.0168
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	172989148	172989533	12	-1.8076
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	172995979	189221258	10903	0.0052
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	189221360	189221375	2	-2.6924
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	189221424	189436915	209	0.0083
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	189437086	189437410	8	-0.8776
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	4	189439872	191027923	957	1e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	15532	685748	307	0.0654
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	698371	809806	43	-0.6494
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	817850	6739567	5005	0.0048
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	6740316	6742168	2	-1.799
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	6742529	21449219	10378	0.0084
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	21449276	21452438	6	-2.143
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	21452496	27819543	3702	0.0038
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	27824645	27827546	2	-1.889
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	27829341	28218887	231	0.006
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	28221005	28221645	2	-2.3715
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	28222685	103851221	42939	-0.0032
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	103860373	103860604	4	-2.983
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	103861049	177198449	48176	0
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	177227551	177232605	3	2.8197
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	5	177254965	180790320	2000	0.0193
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	149661	253861	99	0.0318
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	254267	380821	102	-0.369
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	381149	6026211	4657	0.0065
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	6033931	6034436	3	-3.2961
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	6037045	7450330	1174	-0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	7450502	7452363	7	-1.0377
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	7452610	31286305	16343	0.0032
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	31286531	31296451	8	-1.2295
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	31309924	32469967	513	0.009
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	32474941	32626618	56	-0.5153
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	32650612	53931151	13713	0.0035
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	53931230	53931855	5	-2.0991
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	53935348	62440280	2819	0.0154
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	62443751	62454722	11	-0.9582
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	62459551	77439868	9419	0.0035
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	77440048	77452757	20	-0.901
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	77461073	78962889	975	0.0164
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	78969065	79035185	110	-0.7651
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	79039234	103734829	15441	2e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	103737976	103762061	45	0.9852
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	103765470	104897473	730	0.0057
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	104909015	104943423	22	-1.0896
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	104943750	117044688	7436	-0.0034
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	117055707	117055764	2	-1.8076
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	117056555	162959743	30255	0.0019
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	162960201	162967096	7	-0.9488
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	6	162971548	171051005	5682	0.0095
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	43355	38290714	27350	9e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	38294101	38386812	120	-0.3482
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	38387443	105158056	36922	0.0039
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	105160424	105166520	3	-1.9981
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	105166776	133778652	17561	0.0064
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	133785177	133795841	29	0.397
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	133798053	141769691	5197	0.0059
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	141770129	141792107	38	0.3764
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	141795281	142474939	446	-0.0374
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	142476719	142486045	27	0.869
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	142486115	143218858	469	0.0028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	143218968	143532978	90	0.2914
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	143532998	154389895	6747	0.0075
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	154393171	154399613	4	1.2349
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	154400830	156391790	1609	0.0077
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	156393168	156394179	3	-3.1837
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	156394908	159116835	1604	0.024
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	7	159116901	159127004	25	0.4265
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	31254	3784187	3428	0.0074
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	3787060	3790106	24	-0.7649
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	3791218	7226436	4382	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	7237903	7831645	156	0.4754
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	7832054	12234298	3304	0.0084
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	12234400	12438891	94	0.4751
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	12443055	15774356	3101	-0.0042
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	15777915	15786889	7	-1.0458
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	15788269	24976202	7290	8e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	24976536	24984333	20	0.5084
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	24991104	39246675	9007	0.0095
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	39247111	39388779	58	-0.3362
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	39389015	83269283	24671	0.0033
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	83271376	83295018	12	-0.9088
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	83297580	85262883	1147	-0.0048
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	85263086	85268666	17	-3.0119
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	85270682	112288556	16089	-0.0019
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	112291352	112294466	5	-0.8399
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	112294670	112295260	6	-2.802
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	8	112300281	146298155	22873	0.0054
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	9	46587	44629223	31338	-0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	9	44727859	44855737	36	-1.3268
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	9	44866028	104763271	23865	0.0036
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	9	104763565	104863544	112	-0.9603
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	9	104868071	141091394	24283	0.004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	72809	24377674	19173	0.0051
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	24377675	24378054	10	-2.7513
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	24378908	27223903	1988	0.0084
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	27225904	27227765	8	-0.9649
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	27228350	46511281	10294	0.0041
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	46527677	47055711	87	0.3561
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	47058792	47067481	28	-0.234
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	47068227	47546130	73	0.3736
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	47546323	47897394	186	2e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	47912899	47948060	3	-1.3296
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	47960476	48736766	290	0.0195
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	48771950	49287603	23	0.8513
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	10	49292463	135506704	58645	0.0022
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	198510	4973095	2480	0.0209
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	4973400	4973470	2	-1.7087
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	4973543	18949072	10231	2e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	18949109	18961935	55	0.4212
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	18961988	23584209	3845	-0.0045
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	23584216	23584367	2	-2.7665
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	23585062	34719318	7520	4e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	34719759	34723436	3	-1.6934
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	34723573	55363340	10384	0.0011
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	55374032	55376498	9	-0.7917
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	55376511	55442318	39	-2.4825
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	55444211	55445294	4	0.1859
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	55445945	55453009	7	-1.6242
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	55453576	85887957	17435	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	85889658	85898821	17	-0.8418
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	11	85899812	134944770	34799	0.0029
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	150442	2235889	1262	0.0159
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	2245862	2257920	40	-0.6465
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	2258023	13499671	7673	0.0015
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	13500239	13507228	4	-1.6519
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	13509249	33294660	13799	-0.0036
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	33301406	33307374	26	-2.5698
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	33308360	48725042	7319	4e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	48725239	48725415	3	-2.1612
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	12	48730036	133778189	54633	0.0037
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	13	19026949	69251505	32922	-0.0029
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	13	69251649	69268242	26	-0.8049
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	13	69269119	115108397	31079	-0.003
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	19002124	20157843	80	0.087
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	20200183	20420239	107	-0.3775
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	20422583	22560159	1488	-0.0079
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	22561466	22955716	346	-0.3627
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	22959292	53807844	19115	-0.0025
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	53811040	53812059	5	-1.6805
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	53812252	106547314	33826	6e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106547507	106561441	9	-3.3013
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106567100	106715489	67	0.0137
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106717356	106746725	14	-0.5768
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106746958	106872062	61	0.0502
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106874361	106939788	60	-0.6558
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	14	106943522	107285437	215	0.0044
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	15	20016328	20601723	123	0.1003
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	15	20601769	20830582	33	0.4839
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	15	20843562	102469040	51725	0.0028
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	60777	12411508	9178	0.007
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	12415828	12426645	7	-1.0004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	12426669	14989839	1922	-0.001
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	15048768	15049885	9	0.6958
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	15049981	15094442	47	0.2665
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	15094586	32564749	8945	0.011
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	32565129	32614875	17	-0.7047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	32614891	78371608	21539	0.0016
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	78372440	78381263	14	-2.0952
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	16	78383140	90287535	10615	0.0122
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	526	660399	331	0.0271
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	661492	661556	2	-1.8377
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	661705	16654301	10154	0.005
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	16657331	16735532	11	0.7461
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	16738160	16741528	4	-0.6409
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	16741784	18358946	919	0.0201
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	18358949	18465221	27	-1.6676
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	18469197	39423014	9484	0.0063
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	39423026	39430531	23	1.2217
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	39432724	44177107	2515	0.0148
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	44177458	44764994	162	-0.2714
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	44784652	55687489	6999	0.004
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	55688333	55688993	2	-1.8645
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	17	55691993	81049726	14567	0.008
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	11543	40051678	23995	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	40056569	40057767	25	-0.5593
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	40058395	63202860	15841	0.0016
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	63202976	63207257	18	1.0598
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	63207273	63767140	413	-0.0401
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	63767288	63767922	2	-3.1287
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	18	63775595	78015057	10350	-0.0031
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	19	90910	59097854	29299	0.0142
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	61305	1560787	1196	0.0166
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	1560802	1582207	37	-0.3127
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	1590257	1593893	5	-1.3281
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	1597946	61179294	40427	0.0047
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	61179388	61182062	2	1.9676
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	20	61183145	62956153	709	0.0698
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	21	10736871	23651134	6435	-1e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	21	23655900	23669292	11	-0.7529
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	21	23673883	44968053	16100	-0.0044
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	21	44970873	44972812	2	-2.525
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	21	44973667	48096957	1762	0.0213
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	16052528	24271745	4580	0.0501
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	24283016	24330269	27	-0.4434
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	24331967	40793260	11599	0.0068
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	40794590	40794820	2	-4.0824
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	40797672	47166189	4145	0.0016
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	47167866	47169215	2	-1.805
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	22	47169270	51234455	3173	0.0201
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	168477	28259809	17287	0.0018
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	28259910	28309707	38	0.4418
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	28321866	55702659	14914	3e-04
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	55703315	55707556	2	-2.3108
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	55707686	76353650	7796	0.0048
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	76362292	76378656	2	3.1297
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	X	76378658	155182354	44287	0.0016
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	2650438	6117910	866	-2.7206
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	6120432	6296423	80	-3.9638
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	6299046	7350046	444	-3.006
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	7350390	9839261	1246	-3.3694
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	9839928	15024621	664	-3.1026
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	15026424	15030817	5	-6.3144
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	15032288	15590276	247	-3.1923
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	15590342	15594523	3	-7.6439
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	15594889	19063565	1832	-3.285
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	19068122	19104059	14	-4.5484
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	19106245	20842231	802	-3.5535
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	20848128	21024613	93	-4.1467
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	21025062	24505988	1265	-3.3162
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	24510518	26218232	323	-3.8069
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	26222820	26517533	83	-2.9078
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	26526212	27315972	90	-4.281
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	27367487	27529084	35	-2.4546
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	27535030	27600323	21	-3.8855
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	27601827	27720551	37	-2.5012
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	27721084	28423938	251	-3.8556
WAXEN_p_TCGA_252_253_N_GenomeWideSNP_6_E11_1270612	Y	28438116	59018259	179	-2.8858
