Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	61735	17225225	8841	-0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	17225367	17235698	5	1.363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	17235852	72768498	34193	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	72768916	72811133	45	0.9307
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	72811148	76050844	1932	-0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	76054763	76054854	2	-2.8413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	76059509	95134329	12532	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	95135107	95135155	2	-1.4518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	95135359	102830741	4985	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	102830754	102830769	2	1.6226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	102830836	104159384	621	-0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	104163499	104303403	28	0.5275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	104303501	106013376	919	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	106019205	106022090	14	0.8776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	106022344	110224384	2658	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	110224427	110242953	32	-0.714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	110244998	112690248	1955	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	112690326	112697390	26	-0.3797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	112705956	144949975	5313	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	144957688	145289199	142	-0.2888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	145290304	152555706	2578	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	152555767	152586238	30	-1.4046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	152586278	196812507	29836	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	196812530	196815791	2	-3.3066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	196816730	248818483	35802	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	248825137	248825263	2	-2.3832
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	1	248825820	249224388	137	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	12784	4205687	2988	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	4213864	4223167	36	-2.0957
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	4223512	77974045	50520	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	77976698	77996666	46	0.5852
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	77996870	114362015	17165	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	114362414	114362416	2	-2.1712
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	114380821	126442223	7659	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	126451651	126451913	2	-2.4786
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	126451932	213181322	52502	0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	213186549	213191825	25	-0.8673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	2	213192126	243089456	19065	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	60345	224602	157	0.0608
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	230022	232800	4	-1.4335
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	234877	6646543	5680	0.0297
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	6651128	6653114	19	-2.8817
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	6653148	6653332	4	-1.3512
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	6655078	129761124	76718	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	129762859	129799013	49	0.4057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	129799597	158350118	17674	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	158350884	158351545	2	-2.9266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	158358872	161515597	1930	0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	161515627	161515649	2	2.0651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	161515944	162530870	691	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	162532950	162540490	7	-1.631
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	162545716	165787544	1858	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	165790022	165790342	2	-1.8239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	165791692	187595294	13546	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	187595378	187595713	2	2.1907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	187595740	192607973	3633	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	192608082	192608625	7	0.9445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	192609105	195263161	1689	-0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	195275395	195464124	47	-0.422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	3	195464315	197896118	1179	-0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	12281	9464537	5249	-0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	9464972	9470734	2	2.09
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	9471258	10210390	551	-0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	10223416	10231498	28	-1.7724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	10234214	10234266	2	2.3556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	10234608	34779004	16985	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	34779025	34824725	41	-0.5261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	34829872	69255070	19468	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	69255070	69374955	29	0.5322
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	69375160	69485979	63	-1.6075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	69489335	70130820	332	-0.0423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	70130909	70231799	50	-0.5411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	70232022	104215706	20672	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	104218100	104218102	3	1.7518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	104220104	104745571	367	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	104751630	104751637	5	1.2517
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	104751644	112307051	4461	-0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	112307066	112307080	2	1.85
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	112307357	115175323	1847	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	115175344	115184266	25	0.874
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	115184310	117912648	1677	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	117913454	117922439	4	-1.6563
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	117924974	161880141	26354	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	161880197	161884908	18	-0.658
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	4	161884919	191027923	19208	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	15532	17515801	13408	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	17601553	17625633	14	-0.9879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	17629520	46251306	17371	-0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	46271008	46273502	8	-1.4472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	46278212	68846303	12410	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	68867294	69118135	5	-1.0968
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	69233427	178107822	68311	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	178109975	178113163	3	-2.5701
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	5	178118855	180790320	1552	-0.0176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	149661	29836239	21732	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	29836475	29836636	3	-2.1091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	29836703	29850380	23	0.317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	29871636	29898897	12	-5.3395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	29899677	32501299	1192	0.025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	32508476	32518769	5	-1.7182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	32527284	32690027	91	0.079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	32690797	32690830	3	2.281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	32692227	33708776	578	-0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	33710020	33710038	2	-2.066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	33713610	53931067	13112	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	53931084	53931855	8	1.5789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	53935348	68121264	6377	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	68125706	68159827	20	-0.7637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	68159916	71727564	2236	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	71728866	71738480	7	0.7533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	71741283	77014948	3361	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	77016900	77016926	3	2.528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	77016993	77436532	295	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	77439868	77452673	19	-0.4935
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	77452689	103734829	16570	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	103737976	103751564	20	-0.4334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	103751877	103762061	26	-1.3435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	103765470	148501944	28319	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	148506612	148506944	2	-1.833
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	148507255	162426461	9746	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	162428289	162430993	4	1.4441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	6	162433917	171051005	6167	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	43355	54380373	38563	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	54386505	54386514	5	-1.813
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	54386517	62678022	2395	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	62679041	62823385	20	-0.6465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	62829626	63109334	29	-0.0551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	63109424	63112016	8	-0.8218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	63112265	64568852	688	-0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	64594065	64595698	6	1.077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	64637128	70420438	3153	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	70423250	70426141	2	-2.4954
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	70428243	109441212	22528	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	109441244	109453910	11	-1.9213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	109453982	126044974	10034	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	126045482	126046876	13	0.8434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	126046877	141769680	9943	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	141769691	141792107	40	-0.5572
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	141795281	142474939	451	-0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	142476719	142479722	8	-3.5064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	142479807	142486045	19	-1.6348
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	142486115	153147638	6462	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	153147645	153147712	2	-2.5698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	153147715	158117595	3475	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	158128588	158132165	2	2.1083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	7	158136986	159127004	639	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	8	31254	64848636	44615	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	8	64848897	64849510	7	1.4176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	8	64849723	115634707	30223	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	8	115634907	115641002	20	-0.5322
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	8	115641072	146298155	21083	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	46587	44404912	31459	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	44424451	44837527	38	-1.2892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	44840918	69858999	335	-0.1277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	69860033	69889492	4	1.2846
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	69893567	79554460	6376	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	79556881	79566864	5	-1.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	79566889	85377227	4052	-0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	85377448	85378921	3	1.427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	85379706	87267378	1429	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	87267699	87267793	2	1.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	87274748	90522594	2420	-0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	90554151	90554219	2	-2.1592
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	90557957	93609577	2035	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	93609668	93610132	3	1.5409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	93612959	106566497	8582	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	106568696	106569290	2	-2.986
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	9	106570702	141091394	23164	-0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	72759	27587531	21453	0.0501
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	27593427	27706601	90	-0.9595
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	27709411	47055654	10112	0.0346
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	47055711	47059806	22	0.7442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	47059821	48902376	563	-0.0261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	48928791	49082570	11	-0.8426
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	49212771	57587929	5722	0.0519
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	57588292	57590768	2	1.8038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	57593097	67306079	6756	0.0474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	67306158	67311183	21	0.6526
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	67311196	81523306	9275	0.0415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	81559043	81559312	3	1.6902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	81559401	89046064	5210	0.0319
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	89046498	89069796	3	1.816
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	89070745	124341534	23905	0.0433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	124343951	124351013	7	-0.8982
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	124356812	132586555	6195	0.0399
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	132590821	132591791	3	-1.5471
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	10	132595971	135506704	1717	0.0267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	198510	5787405	3302	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	5788080	5809139	32	-2.6922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	5809338	18929815	9409	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	18931328	18958890	46	0.3079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	18960024	25219111	4984	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	25219145	25221012	2	2.0867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	25224253	55376023	16884	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	55376236	55442318	43	-0.7029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	55444211	91830489	21396	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	91830658	91831043	2	3.3117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	11	91832704	134944770	31036	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	150442	865970	416	0.031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	869109	874029	18	-3.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	875354	2235889	831	0.0367
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	2245862	2257920	41	-0.7157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	2258023	11503942	6107	0.0265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	11503975	11541029	32	0.5629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	11543386	33937939	15877	0.0254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	33938060	33940823	4	1.3508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	33940935	90483350	32473	0.0198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	90491669	90491687	2	-2.7849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	90491816	99795648	6458	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	99795737	99798734	28	-0.39
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	99803093	126994227	17684	0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	126994913	127004590	8	-1.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	127007475	127125380	92	0.0847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	127125744	127130492	2	2.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	127131040	132120715	4389	0.0358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	132132584	132133335	13	-1.8134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	12	132142331	133778189	571	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	19026949	32532121	9636	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	32532622	32537944	15	-0.8001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	32538094	38071135	3908	-0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	38072036	38084732	15	0.5187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	38084757	46799169	6042	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	46802129	46802357	3	1.2675
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	46802657	51545054	3080	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	51546911	51549198	2	2.3924
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	51549557	51555862	4	0.7535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	51562372	57763147	3415	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	57763290	57778380	28	-0.6248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	57789714	62528621	2865	0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	62528789	62531265	2	-2.0337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	62542910	72479547	6127	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	72480449	72480605	3	1.4691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	72486483	82003980	6615	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	82004436	82013851	9	-0.9661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	82019471	82026346	6	-0.2407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	82030805	82033605	5	-0.8754
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	13	82039787	115108397	22501	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	19002124	20420151	186	-0.2628
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	20420239	74001123	34124	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	74006707	74020979	8	-1.5661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	74029900	106751284	20904	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	106753859	106753867	3	1.7958
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	14	106754003	107285437	330	-0.1559
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	20016328	20262236	53	-0.1035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	20264286	22582902	365	0.388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	22584431	24504157	943	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	24508708	24512035	2	1.9444
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	24514620	30386411	3734	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	30398229	30730310	85	-0.3042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	30730703	40048537	6483	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	40053630	40058092	2	-2.1871
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	40058493	47519119	3855	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	47519545	47519554	2	1.8938
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	47525661	76891241	18818	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	76891511	76895344	14	0.7089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	15	76895767	102469040	17691	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	16	60777	78371608	41772	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	16	78372440	78384738	16	-2.496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	16	78384765	90287535	10642	-0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	17	526	44213712	23539	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	17	44214166	44351701	82	0.3807
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	17	44351929	78628863	20708	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	17	78629793	78634179	2	2.2601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	17	78634300	81049726	962	-0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	18	11543	78015057	50794	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	19	90910	59097854	29356	-0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	61305	1552503	1185	-0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	1557190	1560999	21	-0.5862
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	1561580	1593893	41	0.5228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	1597946	16662218	11766	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	16662745	16667772	13	-1.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	16669877	36042200	10149	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	36045383	36046796	2	-1.7388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	20	36054493	62956153	19319	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	21	10736871	48096957	24397	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	16052528	24271745	4591	-0.0405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	24283016	24330218	26	-0.5502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	24330269	24331967	2	-3.645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	24332625	24337949	4	-0.4379
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	24344422	24402442	23	0.4695
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	24402461	25799113	958	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	25799499	25806685	11	-0.582
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	25806813	34173406	6295	-0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	34174947	34174973	3	-2.4224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	34174985	37742992	2783	-0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	37748729	37749946	4	-1.4548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	22	37750667	51234455	8858	-0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	X	168477	58282178	33544	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	X	58283218	58287848	5	-3.5942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	X	58288508	149445226	47879	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	X	149446036	149457490	10	-1.3395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	X	149457585	155182354	3007	-0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A09_801950	Y	2650438	59018259	8635	-0.9713
