Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	3218610	8244353	3090	-0.3783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	8249988	8811184	262	0.294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	8812214	37169413	14382	-0.3723
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	37169665	37197720	32	-3.8484
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	37200401	37211846	7	-1.7416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	37216637	50185479	7031	-0.376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	50190931	50226578	16	0.2894
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	50232173	57666531	4402	-0.4004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	57666761	57667231	2	-2.5147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	57668279	68982335	8120	-0.4299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	68983674	68983678	2	-1.1316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	68985010	69001970	15	-2.0427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	69006454	116727982	28061	-0.4488
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	116728946	116741724	13	-2.8747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	116742761	119797210	1785	-0.4244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	119799665	160989893	6400	0.3142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	160992303	161054054	39	0.8089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	161057909	182375241	14115	0.2831
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	182376229	182408028	36	0.6853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	182411628	203751341	12818	0.1398
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	203751971	203760414	2	-1.2942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	203760656	230201143	16863	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	230204550	230375929	155	-0.9609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	230380510	236484843	4127	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	236485081	237666857	988	-0.5393
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	237667361	245532101	5291	-0.0293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	245533060	245744830	171	-0.5261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	1	245748346	247813706	768	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	484222	14548239	8735	0.2406
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	14555574	14786530	177	-0.4625
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	14787029	96071504	41628	0.2456
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	96500454	99012259	832	-0.4294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	99015077	100303718	606	0.2314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	100305067	104041563	2399	-0.4609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	104044242	141732043	18909	0.2408
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	141734389	141764693	35	-0.1866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	141764878	141827362	50	-0.9455
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	141832339	141928949	60	-2.8036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	141931798	142062178	76	-0.6897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	142064988	148003475	3367	0.2036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	148005144	148791917	425	-0.4845
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	148799980	173657900	14628	0.2204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	173659913	173815062	123	-0.4779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	173817340	188301336	8066	0.2306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	188308023	188335246	18	-0.6033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	188340335	195095507	3266	0.2188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	195103928	195192001	50	-0.4699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	195192999	195198240	2	-1.7586
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	195198744	195715784	212	-0.5126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	196217326	210380205	8128	0.2274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	210386175	210419811	20	-0.4984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	210426133	214439058	2364	0.2038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	214444852	214457908	12	0.7387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	214461866	234138090	11856	0.2423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	234138324	235359869	915	-0.4602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	235364851	236407963	712	0.2939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	236416658	236770736	231	-0.4422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	2	236771407	242476062	3309	0.3025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	2212571	20670660	11011	0.2888
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20673101	20706231	26	-0.0249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20708134	20731953	13	-0.9883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20738256	20771335	31	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20777360	20848048	48	0.3047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20849445	20856686	10	-0.4624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	20872382	21352372	142	0.2411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	21355238	21523342	130	-0.4922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	21524405	30147231	5078	0.262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	30150329	46016906	9530	-0.4477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	46021218	46504906	314	-2.669
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	46507922	46635328	74	0.1974
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	46643141	49915328	1216	-0.4382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	49918751	50098354	73	-1.8184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	50101142	54925344	2562	-0.5023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	54927901	58376639	2286	0.2437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	58377159	59389931	511	-0.5262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	59390516	59705135	324	-2.9048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	61026351	76424975	10397	-0.5152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	76426770	76432986	3	-1.9342
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	76434706	83857575	4036	-0.5795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	83861300	83952890	59	0.2106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	84008317	84995062	456	-0.564
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	84995591	90485962	2532	0.2256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	93734671	93933460	74	-0.4508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	93935874	94736460	379	0.7366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	94737484	95184490	298	1.6942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	95191718	96038338	411	1.9776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	96041287	116440934	11360	-0.4674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	116441738	116545385	146	-2.239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	116547963	134106494	10213	-0.4144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	134106768	152497886	9693	0.2819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	152503907	152532750	21	0.7103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	152532793	153300565	442	0.2456
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	153306978	153381492	50	-0.4602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	153386966	160028589	3567	0.2705
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	160035671	160125603	37	-0.3494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	160131576	165021836	2166	0.261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	165022274	165022914	2	-1.1946
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	165030679	174123537	4612	0.276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	174129695	175051214	607	0.6794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	175059610	175078480	45	0.2378
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	3	175759770	197538677	11285	0.672
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	1053934	12561257	6485	-0.0593
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	12562544	12607222	25	-0.9736
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	12607282	91822647	43815	-0.0775
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	91822670	91908576	44	-0.3901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	91910893	92037951	117	-0.0632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	92043674	92283771	137	-1.0907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	92286224	92598587	109	-0.062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	92600381	106625263	7620	0.2296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	106631237	106905198	124	-0.1072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	106909442	142517129	19500	0.2185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	142517436	142521709	3	-0.7755
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	142521981	143616789	711	0.2317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	143618753	143638210	16	0.7641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	143639211	167851692	13286	0.2148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	167860875	167932026	47	-1.0656
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	167938604	185425574	9036	0.2088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	4	185426238	188763651	1585	0.471
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	914233	73696812	39050	0.2504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	73698279	73769175	65	0.7794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	73776546	75458711	909	0.255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	75469007	75469034	2	1.5023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	75474244	142432114	36760	0.2374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	142437071	142643874	176	-0.4931
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	5	142651619	180360469	23466	0.2543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	1014281	22617758	15227	-0.4566
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	22618197	22623203	2	-2.5252
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	22623239	23129483	351	-0.4763
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	23129600	23399947	198	0.2646
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	23404087	24322037	632	-0.4859
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	24325809	24326285	2	-2.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	24328706	52881235	14808	-0.4393
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	52881818	53818262	648	0.2501
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	53819151	62234535	1989	-0.4506
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	62234536	124428780	34463	0.2429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	124428968	124581546	69	-0.0788
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	124582051	155716472	19810	0.2459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	155718566	157115014	987	-0.4819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	157115791	157535560	253	-2.7514
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	157713662	161014675	2050	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	161014738	161015250	3	-1.1798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	161015266	164703881	2168	-0.0084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	6	164812589	170903919	2712	-1.0355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	705284	14095465	6357	-0.4542
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	14096261	14105880	16	-3.3668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	14117117	18501127	2449	-0.4795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	18503947	22764026	2524	0.2584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	22765232	22936202	157	-0.4389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	22943385	81439193	29894	0.2648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	81440584	81442548	2	-1.1769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	81443686	86620077	2894	0.2673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	86621010	86681028	57	-0.4141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	86684526	90808428	1274	0.2392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	90809776	91446026	454	0.6615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	91448843	110775098	10251	0.2513
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	7	111353361	158385118	24913	-0.4639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	8	617667	109442453	59734	0.2553
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	8	109443223	109445540	2	1.877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	8	109450467	145232496	21754	0.2571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	789932	9238929	5227	-0.4354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	9411107	9666565	181	-2.5862
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	9681202	21936239	8044	-0.4388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	21944287	22034112	82	-1.9951
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	22035479	112160351	37097	-0.4291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	112160912	112645468	453	-2.7178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	9	112648695	140938752	16854	-0.4048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	415240	20328323	14221	0.3586
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	20328412	20330010	9	-0.3236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	20336797	28797753	5347	0.3503
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	28798431	29468436	507	-0.2642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	29470436	34416557	3498	0.3688
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	34418383	34437906	20	0.7438
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	34439894	53869113	6949	0.2587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	53869678	53921277	48	-0.0402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	53921459	77328667	13508	0.3011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	77330990	77359816	15	0.922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	77359983	80105898	2090	0.4718
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	80106343	80106425	2	1.8169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	10	80106465	135225087	34607	0.4577
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	456120	8789119	4420	-0.4168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	8789625	8868677	63	-0.9519
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	8873595	49131882	25585	-0.4403
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	49136599	116610693	35067	0.2721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	116611599	116670676	39	-0.434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	116674818	120548353	2591	0.2984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	120549967	120553706	8	-0.5017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	11	120554041	134142530	9399	0.2755
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	889902	18749214	10134	-0.4112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	18759290	22747967	2445	0.7222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	22750705	23262095	394	-0.4686
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	23264000	24097354	512	0.2239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	24097579	24265208	113	-0.0997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	24265402	24629108	298	0.2155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	24634126	25402069	405	1.9304
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	25402208	25402468	3	0.3386
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	25404604	26433912	759	1.9552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	26439726	29321135	1781	0.8068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	29324560	33518640	2689	0.273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	33518860	41301332	1204	-0.439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	41301363	41570075	180	0.2423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	41580177	41780758	131	-0.5079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	41781635	41979843	201	0.2482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	41983457	42954557	567	-0.4587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	42959426	43063188	73	0.2478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	43063536	53062259	5106	-0.4275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	53070502	53070688	2	-2.0589
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	53071382	53115770	38	-0.4442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	53117023	53117157	2	1.2745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	53118658	54087601	480	-0.3879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	54087648	54091807	4	-1.3059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	54092674	54162474	53	-0.4084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	54165001	54801204	293	0.3213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	54801900	54802706	3	1.4986
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	54802872	55358902	334	0.3048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	55361021	57317944	1020	0.7151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57317976	57318582	3	-0.3461
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57318731	57656705	140	0.7388
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57657562	57733209	27	0.2485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57736215	57815922	40	0.7756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57817985	57861484	26	0.3005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	57863030	58393503	252	0.6867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	58396673	65267602	4157	-0.455
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	65268611	65911456	354	2.3997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	65912521	66754179	529	2.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	66756234	67279004	380	1.4762
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	67281705	67292288	10	0.6901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	67292835	67775515	363	-0.4291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	67783108	68721462	747	1.8243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	68723334	68897711	141	1.5823
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	68902426	70029336	730	2.1716
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	70035437	105697567	21841	-0.4591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	105701320	105897728	145	0.2959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	105898393	105903875	7	-0.3995
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	12	105907065	133161346	14751	0.2333
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	19450806	75541799	32005	0.1731
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	75542347	75795648	132	0.5997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	75795729	90988406	8915	0.1533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	90995205	90995610	2	-1.3078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	91003899	93807189	1775	0.1372
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	93809775	93843421	42	0.5489
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	13	93848635	114987458	13717	0.1885
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	20501368	45600524	12907	-0.4534
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	45602020	45666524	25	-1.7484
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	45672862	45767666	38	-0.5336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	45769039	45803481	20	-1.2756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	45803558	67634318	12933	-0.46
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	67638455	78294672	6483	-0.118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	78296244	78296468	2	-2.504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	78298732	99593063	14022	-0.3145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	99593169	99600836	5	-1.6209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	14	99600890	105988038	2936	-0.3943
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	15	23687685	80278517	31833	-0.4072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	15	80281426	101884307	12632	0.3122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	653459	6509671	2582	-0.349
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	6512138	6632888	142	-3.0923
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	7132183	11100333	2835	0.7551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	11100373	31850299	8324	0.321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	46507665	78118246	19301	-0.42
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	78122131	78186267	41	0.2354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	78186514	78519780	358	-0.4189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	78520861	78596521	133	0.2762
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	78614214	78749683	131	-0.4489
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	16	78930393	89379936	6929	0.321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	17	987221	34308470	13715	0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	17	34308682	34311387	2	-2.665
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	17	34312153	66058921	15795	0.0463
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	17	66062316	80917016	7455	0.4051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	18	329586	7073719	3395	-0.4278
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	18	7075100	7075130	2	-1.9742
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	18	7076101	8087323	682	-0.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	18	8091265	8383520	220	-2.9768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	18	8383646	77109240	38292	-0.4337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	284018	1025304	116	0.5139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	1025362	1033298	5	-0.3742
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	1038222	21358986	7600	0.3395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	21364640	21365557	2	-1.4326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	21367474	21384837	15	0.2467
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	21406019	21458120	27	-0.3912
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	19	21458694	58878226	16185	0.1982
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	455764	14615094	8932	-0.4141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	14615924	15219500	68	-0.771
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	15220001	26197899	7817	-0.4247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	29843973	34557619	2258	0.3227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	34562581	34597975	21	0.7081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	34605429	42548132	5045	0.3078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	42548609	42551373	6	-0.5785
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	20	42551920	62219837	13113	0.3254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	15347621	15837408	278	-0.0248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	15837845	24487473	5269	0.2591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	24487486	24644189	6	-0.5232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	24644984	24758594	63	0.2117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	24768726	27325288	1691	-0.4823
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	27325805	27520931	158	0.2612
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	27523857	28072863	416	-0.4772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	28072916	28119065	55	0.2678
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	28123673	29130539	816	-0.494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	29131901	29200519	47	-0.9025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	29200556	36064321	4296	-0.4303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	36067129	36219317	106	-2.7477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	21	36219566	47678774	7358	-0.3918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	22	17423930	49331012	16904	-0.3756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	3157107	9932138	1766	0.3821
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	10420185	10447162	17	-0.232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	10451554	29285117	9876	0.3913
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	29288403	29363442	43	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	29365946	64922877	13140	0.4021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	64929624	69605135	1946	-0.3205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	69609446	71702875	871	0.4374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	71715549	72210547	105	-0.337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	72225593	72673404	196	0.4368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	72676525	86405409	5429	-0.3498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	86410795	86420778	14	0.4647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	86421634	109094418	9376	-0.3433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	109097066	109097142	2	-2.4254
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	109105321	138602776	14044	-0.2169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	138613430	138627477	19	0.5269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	138630029	145419142	3058	-0.2245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	145421183	145438117	16	0.499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_A10_802026	X	145443322	154905589	3817	-0.1687
