Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	51598	25455928	14166	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	25465715	25534592	30	0.4578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	25534799	34875241	4970	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	34875257	34886855	20	-0.6461
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	34888129	72535958	23776	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	72541006	72583736	48	-1.084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	72584492	105814899	21028	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	105820728	105823898	17	-0.5121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	105825578	108567878	1963	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	108570825	108618702	2	-2.629
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	108630480	110029038	704	-0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	110034497	110046521	19	-0.8956
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	110047649	112498486	1971	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	112498520	112498535	2	-1.8569
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	112498697	150822151	8042	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	150822330	150846092	26	0.6131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	150846245	151026302	180	0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	151028547	151034488	27	-0.3794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	151034508	159200392	5027	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	159203644	159206145	3	-1.0416
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	159206656	159775499	257	-0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	159780383	159904580	45	0.6205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	159904825	167483561	6014	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	167500598	167508390	7	1.197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	167509025	195065446	18267	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	195065782	195090236	23	0.478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	195090339	197374325	1377	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	197377986	197380463	9	-0.7931
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	197380861	213922617	11324	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	213924816	213928728	14	-0.8835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	213932632	246856648	23070	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	246856911	246875732	9	-0.2674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	1	246875992	247191011	141	0.0318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	2784	4181455	2987	0.0296
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	4183562	4201387	38	0.3391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	4201442	34544573	21081	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	34552819	34555239	6	-2.8262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	34562136	34571412	23	-1.5654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	34571478	34590561	17	-3.156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	34590667	52607972	13047	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	52607984	52635046	39	-2.6022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	52641453	78554465	16791	0.0191
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	78555584	78575410	14	-1.0507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	78579039	82050491	2419	0.0231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	82056717	82168131	68	0.6024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	82171367	96871208	4614	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	96882222	96920270	13	0.5348
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	96922252	100557724	1919	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	100558382	100682660	92	0.5276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	100686714	146580874	27710	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	146580899	146583268	21	-0.471
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	146583379	208058436	36979	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	208058492	208058507	2	-2.482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	208058564	211696512	2206	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	211696622	211698433	11	-0.6507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	211698599	229597066	11788	0.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	229601301	229602368	4	-0.9773
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	2	229605276	242738129	8149	0.0181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	35345	6292359	5581	0.0448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	6294263	6306853	17	0.6243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	6309437	6621543	246	0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	6626128	6628332	23	-0.7476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	6630078	53003415	29916	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	53006776	53014257	37	-0.6808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	53014303	75503860	16925	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	75509797	75757303	82	-0.6206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	75760125	84782374	4985	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	84782448	84783053	7	-0.8624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	84783071	100427166	6005	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	100427201	100432004	35	0.3211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	100432111	131268899	18749	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	131268976	131281425	39	-0.5024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	131281471	133471554	1446	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	133471575	133478374	7	-0.837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	133483167	144768455	6928	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	144768490	144768664	4	1.3052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	144769491	164013564	11916	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	164015644	164023184	7	-1.1714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	164028410	193369057	18511	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	193369366	193376749	6	-1.4847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	193376792	194360596	723	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	194360656	194365597	19	-1.2437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	194369129	196897393	1492	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	196903444	196941179	23	-0.9552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	196941532	196960434	18	-0.3942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	196964365	197184879	82	-0.0168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	197185512	197185725	3	-1.1822
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	3	197194059	199380515	1089	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	2281	9819488	5805	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	9832514	9844366	35	1.357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	9845240	10001452	172	-0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	10002252	10009766	15	-2.3703
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	10011816	34463385	16798	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	34463544	34506399	40	0.4306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	34508213	68943659	19469	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	68964800	68970735	4	-1.4177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	68970737	69027207	10	-0.0284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	69043083	69187710	70	0.4422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	69188929	70155852	329	0.017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	70158099	70266388	55	-0.599
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	70266611	87194247	10446	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	87195118	87198788	19	-0.7099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	87198968	122501423	21260	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	122501918	122510581	29	-0.661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	4	122510972	191261904	42885	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	68532	4006610	2871	0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	4011678	4022857	8	-0.8508
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	4026807	12853889	7334	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	12868780	12891533	14	0.9603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	12902201	15771492	1974	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	15772222	15773597	11	-0.8585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	15776346	57357403	23671	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	57361784	57369272	31	1.7382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	57369290	68882059	7301	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	68903050	69153891	5	-1.4907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	69269183	85902632	9518	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	85906986	85909117	2	-2.1201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	85909921	86131317	128	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	86132779	86154902	15	-0.4091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	86157385	92017384	3087	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	92017433	92021807	2	1.1507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	92025622	96936826	2787	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	96937285	96942439	2	-1.1767
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	96943590	97070877	82	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	97074222	97125076	43	-0.8905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	97125440	155411340	37358	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	155412691	155415152	8	-0.965
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	5	155415293	180722926	16834	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	94661	103841522	65653	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	103844669	103868754	46	-1.2402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	103872163	157699483	34794	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	157701252	157716064	3	1.3414
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	157716982	160952555	2163	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	160952709	160953273	5	1.222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	6	160988032	170892930	7269	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	52911	38277248	27436	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	38277623	38323333	86	-0.524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	38323600	54334250	11037	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	54334297	54354011	11	-1.1697
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	54360982	70058374	6295	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	70061186	70064077	2	-2.3122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	70066179	141409593	42523	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	141416112	141438576	42	-0.5757
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	141441750	143634600	1346	-0.0247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	143634679	143640497	3	-1.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	7	143645122	158819765	9710	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	21254	583041	327	0.028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	584944	585875	8	0.9786
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	585892	585908	2	3.94
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	591043	6476329	7018	0.023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	6476854	6542966	53	0.5143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	6546138	6827707	329	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	6846225	6877045	14	0.3542
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	6877358	7000334	69	-0.0279
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	7011977	7017400	2	-1.9278
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	7021205	7174042	10	0.0973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	7174056	7213713	23	-0.3987
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	7213846	25030393	13986	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	25030439	25040167	24	0.5848
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	25047021	65011190	22751	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	65011451	65012064	7	0.8983
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	65012277	109965846	27068	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	109968577	109970012	2	-1.5556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	109970014	115703730	3146	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	115703829	115710745	30	-0.7192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	8	115710761	146268959	21077	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	36587	12544856	11710	0.0248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	12546594	12552294	3	1.5443
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	12555520	23351805	8733	0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	23353115	23363484	8	-2.2639
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	23368488	41723631	10878	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	41832529	41968375	8	-1.3886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	41975187	43054842	14	0.1074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	43060841	43740182	52	0.6136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	44054868	44569219	49	-0.0294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	44667855	44777523	34	-1.1918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	44780914	67673798	155	-0.0362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	67673801	67678367	9	1.1546
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	67699736	140138515	48232	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	140145139	140152764	6	-0.883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	9	140152969	140211215	12	0.1006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	62759	18213969	14898	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	18225129	18239819	3	-2.2302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	18263653	46094186	16677	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	46111165	46562313	165	0.2475
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	46562328	47417400	205	-0.026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	47432905	47468066	3	-1.5154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	47480482	48315096	283	0.0426
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	48315377	49033015	38	0.3531
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	49051617	58182861	6305	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	58186381	58196344	37	-0.7325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	58196403	115194718	37733	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	115198747	115206855	8	-1.1681
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	115209304	135079131	14572	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	135079709	135079858	2	-2.072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	10	135082644	135356694	151	0.0371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	188510	4195630	1791	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	4206589	4293105	28	0.6071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	4303385	4683016	384	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	4683194	4683467	5	-0.7908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	4685710	5740258	1094	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	5740499	5765914	35	0.3269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	5766037	6064366	240	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	6064845	6078670	8	-1.1083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	6079079	18896898	9170	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	18897432	18918498	57	0.3353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	18918511	31349870	9097	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	31350844	31353656	2	-2.9834
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	31354783	49667437	11969	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	49670283	49714247	18	-0.7407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	49714343	51033319	381	-0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	51040151	51049446	4	-2.3034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	51051627	62161902	4584	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	62166999	62184094	10	-1.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	62198072	101099594	24493	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	101103070	101103174	4	1.2783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	101103422	102135413	650	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	102137350	102138344	3	-1.1893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	11	102140322	134449982	23121	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	20703	9525137	6206	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	9529176	9619559	23	-1.6008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	9626236	33185927	16638	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	33192673	33198641	27	-0.7521
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	33199627	125691333	57197	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	125691697	125696445	2	1.2769
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	125696993	126903883	1049	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	126903990	126909155	8	-0.8866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	126910844	130686668	3330	0.0432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	130698537	130699288	13	-2.0297
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	12	130708284	132288262	572	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	17924949	28117125	7160	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	28123017	28124555	4	-0.9935
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	28126028	36969135	6396	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	36970036	36982757	16	-0.6359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	36986330	51957217	9905	0.0099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	51969153	52055319	17	-0.5707
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	52057852	71374989	11646	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	71375556	71378557	4	-2.5359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	13	71378606	114126499	29137	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	18072124	19213349	80	0.0989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	19227683	19493212	110	0.6436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	19494766	21546230	1431	-0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	21548801	22047918	454	-0.4138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	22047938	105822329	53156	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	105824904	105824912	3	1.4146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	14	105825048	106356482	330	0.0899
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	18276341	18466953	48	-0.0262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	18476969	19787133	261	0.3608
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	19788634	33466175	8160	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	33474182	33508696	19	-1.2514
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	33512869	59471497	16728	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	59475461	59485000	12	-5.553
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	59485220	59485259	3	-1.9114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	59485273	85707612	15930	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	85707812	85710481	14	0.5187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	85710569	91963246	4687	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	91964353	91964377	2	1.4282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	15	91964704	100286563	6184	0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	777	12556360	9432	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	12556479	12556496	2	-1.5178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	12557748	14956269	1703	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	14956345	15023758	62	-0.6271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	15032942	16285163	590	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	16420592	16646939	34	0.6433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	16654430	18501901	997	0.0243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	18513898	18623756	14	0.6612
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	18624806	34328993	7720	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	34329021	34614572	164	0.5237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	34618468	55317940	7219	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	55318474	55318709	2	1.3005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	55318772	74093773	11332	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	74096909	74133499	21	0.4226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	16	74137618	88815036	13217	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	526	4487396	2446	-0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	4491080	4491215	2	-1.6372
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	4491300	8183635	2107	-0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	8188272	8188458	2	-2.2936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	8190183	36675234	16412	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	36676540	36676616	5	0.5792
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	36676629	36684057	19	1.8772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	36686250	41518916	2512	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	41521621	41750195	128	0.2478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	41756832	42107462	44	-0.6066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	42107479	45292316	1625	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	45293472	45296872	3	-1.5584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	17	45297374	78643088	19994	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	1543	38161388	23951	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	38161999	38209839	54	0.5096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	38216223	38310655	68	-0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	38310670	38311399	17	-0.6062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	38311432	62059072	16432	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	62059541	62062569	7	-1.1314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	18	62062856	76116029	10273	0.0197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	19	41910	49597745	21547	-0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	19	49598364	49598387	2	-1.6999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	19	49598459	63789666	7814	-0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	9305	1508802	1204	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	1508922	1538534	42	0.334
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	1541849	43352005	27500	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	43352023	43353118	2	-1.8021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	43356792	52078275	6254	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	52081215	52092058	37	-0.6586
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	20	52095981	62426597	7459	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	9758742	10024517	73	-0.9838
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	10030012	13307761	48	-0.2562
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	13322605	22573005	6342	0.0124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	22577771	22586529	9	-1.1019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	22588870	26098043	2640	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	26100178	26168832	38	-1.0934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	21	26173572	46921385	15248	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	14432528	17112919	1216	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	17128440	17128454	2	-1.7422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	17150421	22600777	3365	-0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	22601123	22662933	37	0.4829
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	22667307	36072938	10081	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	36078675	36079892	4	-1.1297
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	36080613	37620866	767	-0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	37625201	37626850	3	-3.2485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	22	37629060	49581321	8088	-0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	108477	13841518	8504	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	13841706	13856877	15	-5.4205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	13857934	55305461	23563	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	55306445	55307893	4	-2.4956
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	55307966	102233790	21738	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	102234939	102237331	2	-2.4478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	102239769	115052431	6908	0.0121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	115055569	115064666	5	-1.7965
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	115070447	116063299	650	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	116063748	116073315	2	-1.6944
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	116074101	120791339	2834	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	120795749	120799717	9	-4.4249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	120799777	120818068	16	-0.4132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	120818104	120970740	104	-3.6286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	120975181	134083710	7356	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	134124304	134620824	287	1.0655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	X	134625114	154835548	12485	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B08_802096	Y	2710438	57427647	8589	-1.0419
