Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	3208470	5801719	1775	0.0644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	5802359	6554634	336	0.4005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	6564345	22063520	8264	0.0644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	22063618	22139517	52	0.6124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	22143290	31753987	4646	0.0523
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	31754130	32065663	158	0.3936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	32068812	37749328	3023	0.0594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	37774414	38279075	231	-0.4441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	38288291	48117532	5317	0.0648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	48120957	48137411	15	-1.0501
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	48139827	188862529	68970	0.0728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	188864093	188870762	3	-1.401
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	188874456	228518035	24888	0.0291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	228518946	228519075	2	1.0439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	228520220	232026028	2535	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	232029793	232030641	2	1.4855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	232032946	243484788	7745	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	243485054	243581374	64	-0.584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	1	243586741	245880329	949	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	474222	2730845	784	0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	2731410	3434225	384	-0.479
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	3434699	9725435	4425	0.0745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	9725747	9733217	4	-0.8491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	9733707	38583330	16930	0.0648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	38587939	38958063	201	0.4201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	38958206	77608623	22379	0.0601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	77613903	78837541	588	-0.4031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	79551490	129957101	22181	0.0603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	129972308	129989754	14	-0.5228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	129991652	154140112	12872	0.0715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	154141922	154142727	2	-1.0647
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	154144346	156049879	987	0.0772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	156052045	156191309	101	-0.4062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	156191962	240439150	48444	0.0791
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	240439445	241192694	496	-0.2089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	2	241192759	242124735	407	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	526235	27672820	14827	-0.3973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	27673436	27677265	4	-1.5556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	27677288	55761580	16151	-0.4026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	55765069	55782295	17	-0.9355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	55782369	70040490	8930	-0.4069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	70040547	115851644	22163	0.1391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	115857625	115962064	68	0.5279
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	115966848	164552120	26706	0.0741
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	164556318	164655034	49	-0.3257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	3	164656742	199023074	17346	0.1209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	1043934	91713279	50113	0.036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	91715723	91943220	153	-0.3466
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	91949348	93006963	559	0.1301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	93012189	98951493	3165	-0.4073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	98952417	102670333	2098	0.1094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	102679196	103003734	196	0.4582
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	103006571	103016196	13	0.0782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	103024814	103293444	113	0.4651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	103293489	182540206	43219	0.1133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	4	182544233	189836143	3000	-0.4243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	967233	58902146	31502	0.0977
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	58905076	59486776	345	-0.4497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	59489687	155703496	53544	0.0984
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	155705474	155710017	4	-1.123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	155712484	157776020	1425	0.067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	157778301	167918298	6523	-0.4143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	5	167919353	180293075	7065	0.0706
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	959281	17308660	11434	-0.4956
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	17310199	17346628	21	-0.2482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	17346791	17420039	32	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	17420604	17799639	235	-0.2681
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	17807301	19578808	1257	-0.4809
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	19579659	26122005	4416	-0.0157
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	26122468	30583696	1540	-0.3132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	30585214	34039945	850	0.0288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	34040071	37076060	1571	0.2434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	37077362	44654698	4913	-0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	44659177	44753952	78	-0.2833
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	44755352	50397328	3190	-0.019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	50400204	50400298	2	-1.2231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	50400867	67996953	7308	-0.1413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	6	68001850	170745844	59486	-0.3933
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	671810	73286099	37773	0.1125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	73287283	73368480	33	0.432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	73376003	79909879	2699	0.1134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	79912152	86766518	3984	0.4773
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	86767263	87976285	616	0.1305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	87979115	91735580	1157	0.4494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	91736087	91788877	31	0.119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	91792653	93559288	1163	0.4613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	93562731	93964153	254	0.1145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	93967289	115505564	10771	0.5082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	115508869	116653678	821	0.876
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	116654320	126936078	5564	0.4766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	126945593	127338793	221	0.1001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	127341093	148340440	11446	0.4614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	148450452	154183276	2483	-0.4515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	154187551	154200290	11	0.6089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	154204780	155652908	1007	0.9359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	155657367	157792818	1130	-0.4498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	157849116	157854262	6	-1.407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	7	157856763	158077879	95	-0.5
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	607667	20289694	10874	0.0845
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	20290237	20290269	2	-0.8034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	20292764	38646199	11305	0.0793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	38648242	38649634	3	-0.8622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	38652501	71577488	16171	0.1059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	71582594	101250504	16675	0.3193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	101259847	101599126	213	0.7155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	101601081	129083715	16437	0.3453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	129083879	129181047	100	0.6096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	129184578	145149775	9647	0.3322
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	8	145154313	145304484	50	0.7176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	779932	37619496	22456	-0.3732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	37619981	37621583	4	-2.6256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	37622408	81636368	8829	-0.4049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	81640182	81640654	2	-2.147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	81642246	128555745	31083	-0.4141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	128557868	131767234	1548	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	131767674	131774100	3	-1.5516
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	9	131775067	140058573	4006	-0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	405240	21479239	15091	0.1009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	21485800	21584363	56	0.5058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	21588472	21607571	12	0.1556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	21607730	21686967	45	0.4764
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	21689960	65220653	22417	0.1104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	65220692	65228767	4	-0.6192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	65228902	68842909	1940	0.1268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	68842957	69044815	103	-0.3472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	69048063	73422303	2838	0.0773
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	73426208	73921144	233	0.4616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	73923482	90219214	9932	0.1004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	90219516	90583672	218	0.4881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	10	90587608	135075077	27912	0.1143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	446120	4580750	1657	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	4581008	4581596	3	-0.9258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	4582666	94906130	49801	0.1003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	94907548	94909040	4	-0.8908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	94911176	98730811	2497	0.1245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	98736528	98798804	30	-0.3637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	11	98801006	133647740	23216	0.1016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	760163	43578868	22862	0.1139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	43583738	44575353	553	-0.4012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	44587537	70017071	14845	0.1056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	70152452	70500413	210	0.4814
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	70510455	109587010	23763	0.1207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	109592638	109633469	19	-0.58
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	109634171	114097084	2453	0.0758
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	114097364	114098191	2	-1.1224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	114099081	116940473	2132	0.0854
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	12	116940668	131671419	7038	0.4529
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	18348806	30308078	7161	-0.3044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	30309297	30310128	3	-1.6472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	30314899	100953538	41056	-0.3235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	100954603	101609044	555	-0.9017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	101610298	106180636	3029	-0.2589
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	106182239	106182711	2	-1.7283
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	13	106183236	114005560	4746	-0.2809
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	14	19571208	43351995	12546	0.0593
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	14	43356291	43723837	100	-0.4009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	14	43819900	51104768	3604	0.0548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	14	51110824	51305161	153	-0.4753
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	14	51305892	105059083	32990	-0.034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	21238778	52629250	16510	-0.1402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	52630314	52769763	94	-0.7226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	52771380	63877075	7075	-0.1432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	63879635	81306113	9836	0.2277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	81306227	81387078	57	-0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	15	81387231	99701830	10910	0.2411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	593460	75619763	32319	0.1114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	75619866	76373072	689	-0.4394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	76376975	76737852	285	0.0909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	76739487	76982725	246	-0.4732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	76992194	77087419	133	0.1231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	77087858	77097223	23	-0.6148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	77098833	77104310	13	-1.6442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	77105219	77223653	120	-0.4391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	77225709	77307184	89	-1.3606
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	16	77487894	87907437	6928	0.1117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	933971	11170944	5408	-0.3562
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	11171191	11174760	3	-1.6956
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	11175609	21245985	4217	-0.42
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	22294644	58035529	16984	0.2393
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58037405	58197864	82	-0.0229
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58198456	58237238	11	0.277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58237923	58243595	5	-0.1649
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58243876	58297337	28	0.3485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58300992	58329772	15	-0.0976
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	17	58332675	78510305	10211	0.2717
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	319586	7463314	3663	-0.1849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	7465949	9000110	1186	-0.8113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	9008463	14650482	3342	-0.1768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	16943745	18306868	644	0.7271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	18323697	19946159	913	-0.7845
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	19946284	19947890	4	-4.1966
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	19948000	47377192	17226	-0.7673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	47382426	47410166	26	-0.0942
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	47418298	51006276	2210	-0.7525
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	18	51012373	75210228	13337	-0.1203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	235018	5610874	1382	-0.4683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	5617182	5617921	3	-2.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	5621558	7251055	635	-0.4607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	7255492	7295986	6	0.4834
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	7303015	9838148	1193	-0.4419
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	9838344	10937005	444	-0.8482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	10941491	23844832	5303	-0.4409
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	19	32932334	63570038	14965	0.0552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	20	403764	4896081	2781	0.3757
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	20	4901582	5146509	133	0.6457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	20	5147567	15847400	6712	0.405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	20	15847679	16185763	345	0.6687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	20	16186294	61690281	27298	0.3796
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14269492	14666013	220	-0.0974
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14667261	14696642	16	0.3048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14696771	14707337	11	0.6432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14708171	14807690	66	0.3993
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14809399	14823460	13	0.0928
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14826816	14885990	52	-0.5565
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	14887590	15324302	291	-0.0653
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	15334260	15496913	137	0.2877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	15497071	15666645	133	-0.059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	15667649	16102973	179	0.3317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	16112280	33114415	10823	-0.5757
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	33116872	33911497	526	0.2756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	33913939	42648953	6338	-0.4486
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	42649751	42649883	2	-2.0762
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	42649908	44587144	963	-0.4659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	44596816	45030112	201	0.3595
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	21	45040036	46503202	571	0.0277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	15803930	20428687	757	0.4183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	20430718	20622995	87	1.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	22146388	36238624	9212	0.4288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	36240341	36494052	108	0.6659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	36499797	36957292	185	0.3622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	36957866	38231206	556	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	22	38234594	47717016	6008	-0.4659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	3167107	31632721	12880	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	31634753	31648155	14	-1.5454
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	31648392	46865414	6832	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	46869773	46872522	2	-2.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	46872917	91412652	15363	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	91425867	92064986	198	-0.9316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	92069438	96987014	1826	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	96989280	96989307	2	-2.2933
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	96989730	125301708	13617	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	125301906	125302012	2	-2.1853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B11_801930	X	125302976	154558783	12811	-0.006
