Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	61735	17011891	8776	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	17012190	17262247	115	0.3776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	17276241	72768916	34143	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	72768936	72811148	45	1.0587
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	72811904	95674710	14889	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95676511	95676518	2	-1.6142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95680124	104225568	5192	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	104239689	104260032	10	-0.576
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	104260239	106013376	923	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	106019205	106022375	17	0.6734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	106024055	110232974	2670	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	110233037	110240178	16	1.0714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	110242953	148585337	8315	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	148627569	148636769	4	-1.1923
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	148636891	152555527	1695	0.0074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	152555706	152586540	33	-1.9116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	152586576	152761923	174	0.0333
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	152761939	152768359	34	-0.3864
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	152768570	157478538	2499	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	157482454	157482947	2	-1.3979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	157483273	169216937	8829	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	169233974	169241766	7	0.9315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	169242401	179323738	6615	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	179330528	179333315	4	-0.926
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	179339206	185414102	4120	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	185416670	185416712	2	-1.3502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	185420724	196812507	7538	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	196812530	196815791	2	1.937
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	196816730	249224388	35935	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	12784	4216420	2991	0.0256
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	4216452	4222539	29	-0.5741
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	4222649	34520473	20983	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34523978	34525580	2	-1.9449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34525967	34699315	96	-0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34701394	34701735	5	-3.4745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34708632	34717908	23	-1.6186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34717974	34737057	17	-3.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	34737163	52754468	13042	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	52754480	52781542	39	-2.4572
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	52787949	89959761	22882	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	89966824	90121364	66	-0.7924
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	90121415	90182708	36	-0.4654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	90183416	90267121	51	-0.9211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	90269005	98023306	1038	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	98025647	98179204	20	0.4808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	98179580	123477014	15132	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	123479899	123482241	9	-0.7309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	123483653	146865832	14394	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	146865974	146866909	10	-0.6131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	146866934	213369618	40192	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	213370362	213370702	2	-3.1644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	213372988	243089456	18940	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	60345	5883026	5148	0.0418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	5887648	5888521	2	-1.9128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	5889010	37977417	22528	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	37982108	37987142	20	-0.906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	37987774	95456106	34252	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	95466880	95468110	2	-2.6901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	95468680	128399221	19997	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	128405171	128411778	6	1.1079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	128412331	129763698	626	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	129766586	129806236	51	0.3943
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	129806924	162512739	20283	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	162513092	162615915	62	-1.7442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	162623842	162625995	6	-0.786
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	162626572	172274516	5738	0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	172274565	172275896	3	-1.2722
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	172276754	190123953	11517	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	190124222	190125266	2	-1.754
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	190126860	192877962	1928	0.0098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	192878045	192880473	6	1.1015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	192880587	195390680	1500	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	195399075	195455508	27	-0.686
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	195455861	197896118	1192	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	12281	7442062	4327	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	7442126	7445980	3	-1.1152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	7446407	9859897	1092	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	9859901	9864227	3	-1.381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	9865042	10210390	379	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	10223416	10238436	37	0.5355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	10238961	10390715	169	0.0112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	10392354	10402718	17	-0.6413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	10402746	34786955	16792	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	34786990	34829872	37	0.5186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	34829913	44956415	6586	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	44959766	44960589	3	-1.7637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	44960799	48204299	1950	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	48204636	48204648	2	-2.1825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	48205942	64692979	8034	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	64693940	64708258	30	-0.3723
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	64716431	69338564	2877	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	69344612	69537152	77	-0.2886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	69540025	88668945	11782	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	88669107	88672740	22	-0.8627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	88674789	115173700	15926	2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	115175323	115182175	23	0.7907
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	115184229	140229007	14795	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	140232546	140234360	3	-1.5075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	140235073	172369346	19923	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	172374884	172377444	8	2.203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	172377458	172987928	401	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	172989148	172989533	12	0.8498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	172995979	173422522	232	0.0421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	173424947	173428643	7	-0.7779
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	173441132	189221258	10696	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	189221360	189221424	3	-2.4738
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	189221439	191027923	1176	0.0357
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	15532	685748	307	0.0518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	698371	806336	41	0.668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	809047	12800889	9869	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	12815780	12826650	11	-1.6778
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	12833857	15718492	1976	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	15719222	15720597	11	-0.8565
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	15723346	21449276	3552	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	21451200	21452438	5	-2.387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	21452496	25821685	2547	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	25821882	25822027	2	-4.7057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	25824488	46271108	12474	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	46271930	46273502	6	-2.8961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	46278212	52695117	1950	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	52695357	52695970	2	-1.3321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	52697127	57321646	3125	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	57326027	57333515	31	1.8861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	57333533	155476772	60323	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	155476920	155482729	13	-0.6897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	155495250	157924306	1683	0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	157925307	157949553	24	-0.9122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	157951577	180360389	14925	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	180360469	180442400	30	0.4414
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	180442441	180790320	168	0.0233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	149661	254283	101	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	257353	378703	98	-0.3215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	379015	26738903	20080	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	26739008	26754393	9	-0.9919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	26755915	29837072	1447	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	29837187	29849267	16	-1.1138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	29850196	31280823	672	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	31286276	31296451	11	-1.4468
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	31309924	32452929	508	0.0596
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	32454275	32602107	53	-0.47
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	32602269	32626618	14	0.5849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	32650612	44921320	7800	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	44924394	44926571	8	-1.0787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	44928828	53931275	5933	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	53931380	53931803	3	-1.3897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	53931855	67009023	5465	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	67009054	67048629	54	-0.7602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	67049406	73218691	4151	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	73221841	73222063	2	-1.2533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	73227795	74591858	849	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	74592225	74603555	11	-0.5856
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	74603605	77429695	1763	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	77429730	77452641	21	-0.4477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	77452673	103734829	16571	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	103737976	103762061	46	0.6976
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	103765470	134266268	19086	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	134269071	134269632	2	-2.1875
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	134272072	146290787	7731	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146296926	146315689	6	-1.0528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146316348	156750399	7466	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156754149	156754585	2	1.4404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156754606	161032565	2673	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	161032719	161033283	5	1.1676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	161068042	165298415	3318	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	165298816	165309456	3	-1.6676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	165309528	171051005	3942	0.0162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	43355	6963659	3481	-0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	6964024	6965895	3	-1.2794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	6968187	22434780	12611	0.0195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	22435472	22436487	2	-2.8853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	22438754	48580942	18197	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	48581852	48591885	7	-0.9721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	48592025	126045556	43133	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	126045651	126046615	10	1.7251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	126046876	159127004	21045	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	31254	593041	327	0.0495
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	594944	601043	11	-0.6098
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	606117	3540465	2727	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	3541137	3541220	2	-2.1886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	3542961	5594267	3029	0.0317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	5598726	5607214	30	-0.7478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	5607240	6827199	1607	0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	6833368	6837933	2	1.4775
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	6839705	8385797	628	-0.031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	8386150	8386442	4	-2.3196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	8388307	11949551	2926	0.0249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	11987726	12001123	6	-2.1831
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	12034307	12234400	19	0.0648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	12239835	12247486	30	0.5365
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	12260927	146298155	84588	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	46587	5302538	5428	0.0268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	5302551	5302634	2	-1.4649
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	5302749	10403105	4542	0.0309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	10404138	10404986	2	1.326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	10407943	43127313	21387	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	43127845	44114872	48	-0.4707
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	44136790	44241817	27	0.1614
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	44243434	44837527	55	0.4896
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	44840918	140255642	47996	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	140255718	140255833	2	-1.9456
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	140273003	141091394	413	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	72759	17894976	14880	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	17927554	17949857	3	-2.174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	17971816	31246510	9410	-0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	31251334	31251738	10	-0.7276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	31251779	46956772	7286	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	46957085	47546323	165	0.3038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	47547696	47897394	186	-0.0362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	47912899	47913401	2	-2.0761
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	47948060	57180153	5714	0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	57180241	57180317	3	-1.677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	57180321	61358267	3036	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	61364115	61365482	9	-0.7711
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	61365803	67307936	4029	0.008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	67307951	67322795	27	-0.5756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	67322926	135506704	46301	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	198510	4967650	2476	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	4968117	4976272	31	-1.6309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	4976334	5787405	795	0.0225
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	5788080	5809048	31	-0.734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	5809139	101594384	60020	0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	101597860	101597964	4	1.0363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	101598212	107230719	3806	0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107238656	107239128	7	-1.9561
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107252362	107449022	168	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107453631	107454081	2	-1.5549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107454527	118349633	7436	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	118350005	118350122	6	-0.8562
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	118351101	134944770	12334	0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	150442	865970	416	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	869109	875354	19	-0.9025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	876246	8442285	5141	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	8449112	8449217	2	1.6158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	8453466	9633870	625	-0.0227
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	9637909	9713674	21	-1.7046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	9714954	31265057	15243	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	31269298	31409879	92	0.5087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	31410284	45904438	6952	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	45905840	45909537	3	-1.6698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	45913292	119983825	47434	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	119988887	119990733	14	-2.748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	119990748	129228886	5986	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	129230513	129232297	6	-6.9188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	129232545	133778189	3084	0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	19026949	23629187	2894	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	23629210	23633515	13	-2.1037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	23638195	38071135	10650	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	38072036	38084757	16	0.5151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	38088330	39052811	701	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	39057572	39058056	2	-1.8379
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	39065057	64224205	15671	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	64224792	64236692	9	-0.6973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	64239563	72476988	5183	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	72477555	72480556	4	1.5595
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	72480605	115108397	29135	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	19002124	41608358	13829	0.0183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	41610496	41637815	12	-0.5358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	41653977	106538062	41285	0.0068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106541753	106567100	13	0.9417
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106569463	106717356	67	0.097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106720594	106783044	35	-0.2264
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106796025	106802053	7	-1.6175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106815943	106874361	33	0.1512
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106879831	106918094	50	-2.1347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	106918108	107285437	225	0.0325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	20016328	20247155	52	0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	20262236	20581564	53	-0.6074
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	20585988	20590160	15	-1.6233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	20590390	22673399	302	-0.7033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	22681076	24571349	967	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	24574757	24787678	104	0.5604
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	24788341	30386411	3601	0.0139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	30398229	30821758	108	-0.347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	30887956	102469040	46832	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	60777	18429385	12815	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	18551587	18557211	3	-1.2555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	18594400	19944363	712	-0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	19945650	19967362	29	-0.7064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	19970254	29653752	5660	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	29654602	29656093	2	-1.7494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	29656109	32253248	888	-0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	32280234	32878335	110	-0.2842
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	32899247	32950253	12	0.3993
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	32951302	33835319	131	-0.395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	33836801	55795214	6959	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	55796389	55816646	18	-2.687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	55816705	55842382	8	-0.3704
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	55842456	55858793	12	0.8457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	55868439	78371608	14412	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	78372440	78383140	15	-2.6458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	78384738	90287535	10643	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	526	1739788	821	-0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	1739852	1777091	15	-0.5959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	1777427	19497890	11011	0.0088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	19499736	19524751	27	-0.7812
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	19535006	44157597	11621	0.0144
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	44161867	44394414	132	0.3191
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	44394420	44752300	46	-0.6016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	44764994	81049726	21612	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	11543	1723388	1176	0.0222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	1725758	1838112	91	-0.8735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	1841469	51207209	30495	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	51207553	51210640	4	-1.5949
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	51212148	59295311	5484	0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	59295890	59295986	2	-1.4148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	59296287	78015057	13546	0.0218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	90910	9273800	3410	-0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	9274672	9277476	4	-2.9145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	9278121	45748244	18553	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	45748354	45749255	2	-2.0685
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	45756376	53413131	3871	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	53416169	53424020	2	-1.4918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	53431167	54718968	874	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	54719005	54741319	19	0.6233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	54753340	59097854	2615	0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	61305	1560922	1205	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	1560951	1599002	47	0.318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	1599061	61317233	40577	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	61317643	61321854	2	-1.7618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	61322018	62956153	655	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	21	10736871	48096957	24397	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	22	16052528	20975987	2334	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	22	20977077	20977272	2	-2.1681
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	22	20978391	51234455	21224	0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	168477	9891816	5576	-0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	9895993	9917545	32	1.0558
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	9917687	58226916	27892	0.0042
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	58227268	58235816	3	-2.2481
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	58237265	62443272	236	-0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	62443462	62505826	23	0.7448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	62505868	69495497	3299	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69496630	69498679	3	-3.4776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69498696	143626060	40420	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	143631490	143637684	4	-2.4574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	143638124	155182354	6912	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	Y	2650438	59018259	8634	-1.04
