Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	1	3208470	179419017	86871	0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	1	179420057	179420232	2	-1.3986
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	1	179420498	245880329	42117	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	2	474222	242124735	131220	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	3	526235	199023074	106321	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	4	1043934	189836143	102652	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	5	967233	14716047	9474	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	5	14718413	14718615	2	-1.7801
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	5	14720143	76753826	31349	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	5	76753943	76754201	2	-2.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	5	76754382	180293075	59602	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	6	959281	21903731	14537	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	6	21904220	21910541	2	-1.3268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	6	21911042	133152416	59281	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	6	133152750	133153399	2	-1.734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	6	133156198	170745844	22588	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	7	671810	158077879	81278	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	8	607667	145304484	81489	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	9	779932	89914265	37073	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	9	89918461	89946250	3	-1.1861
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	9	89950625	132715349	27449	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	9	132715367	132715588	2	-1.3646
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	9	132715602	140058573	3453	0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	10	405240	19961042	13883	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	10	19961109	19961126	2	-1.2436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	10	19961189	28707231	5614	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	10	28708104	28751053	21	0.6235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	10	28754548	135075077	61296	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	11	446120	133647740	77224	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	12	760163	131671419	73903	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	13	18348806	114005560	56597	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	14	19571208	28793480	4459	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	14	28797605	28798105	2	-1.4589
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	14	28801413	29440901	375	-0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	14	29442516	29469175	10	0.566
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	14	29475584	105059083	44558	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	15	21238778	99701830	44496	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	16	593460	87907437	40848	-0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	17	933971	7386117	3104	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	17	7391635	7391761	2	1.2405
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	17	7394415	9181359	958	-0.0138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	17	9182678	9184618	8	0.8328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	17	9185149	78510305	32900	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	18	319586	75210228	42630	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	19	235018	35976646	11258	-0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	19	35979958	35980380	2	1.3049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	19	35982439	63570038	12686	-0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	20	403764	61690281	37268	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	21	14269492	46503202	20570	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	22	15803930	31912803	6982	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	22	31913233	31913237	2	-1.4955
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	22	31916339	47717016	9937	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	3167107	12948844	3436	-0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	12949190	12955911	4	-2.6493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	12957088	15637161	1422	-0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	15637898	15641261	3	-2.7507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	15644806	19222991	1550	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	19224007	19225925	2	-2.3986
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C05_802016	X	19226797	154558783	57274	0.0044
