Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	51598	10294425	5207	0.0437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	10296857	10297187	2	-1.7883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	10299830	16842587	3551	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	16842765	16984764	60	0.2848
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	16987014	72541086	34145	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	72541504	72583721	45	0.8585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	72583736	75823432	1932	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	75827351	75827442	2	-2.8482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	75832097	104058438	18167	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	104058484	104104926	10	-0.7036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	104105024	108531282	2878	0.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	108535758	108536400	2	-3.9131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	108539019	110034641	729	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	110034785	110041701	13	0.9632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	110044476	112491771	1956	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	112491849	112498697	20	-0.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	112498711	143863085	5401	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	143863316	143863375	3	1.3338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	143863407	147137561	967	0.0422
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	147159969	147603260	156	-0.678
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	147603326	147606209	5	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	147606824	147695830	16	-0.4121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	147703466	150822330	1496	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	150822391	150853200	33	-1.6234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	150853218	151026302	172	0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	151028547	151035324	37	-1.7868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	151040529	159769518	5274	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	159775415	159915245	52	-0.3518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	159916999	166031459	4891	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	166032807	166035137	5	-0.9181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	166036296	194981445	19305	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	194981496	195068065	87	-0.5766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	195068278	221087127	17786	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	221089546	221090392	3	-2.7652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	221093340	227877792	4107	0.0274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	227883479	227886819	3	-3.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	227887079	247191011	14056	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	2784	34516862	24093	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34516947	34571412	37	-0.4209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34571478	34581371	15	-1.0695
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34590017	34602389	13	-0.315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34604049	159369731	74348	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	159370768	159371044	2	-2.4909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	159372949	184282192	15535	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	184285438	184285569	3	-2.9687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	184289140	242738129	35971	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	35345	34709028	25481	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	34715445	34766211	28	-0.9728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	34770592	84782374	32291	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	84782448	84784705	11	-0.8272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	84784721	99382109	5398	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	99391360	99396115	3	-1.6134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	99397507	131245549	19374	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	131246388	131290966	55	0.4691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	131291245	163995433	20281	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	163995786	164108689	68	0.5973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	164109266	194360596	19190	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	194360656	194365597	19	1.2215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	194369129	196122605	1162	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	196122635	196123134	4	-3.8094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	196123769	196897393	326	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	196903444	196932593	22	-0.659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	196941179	197184879	101	0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	197185512	197194059	4	-1.3645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	197203162	199380515	1088	0.0303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	2281	7066261	3968	0.0294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	7067859	7067944	2	-1.8632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	7068084	9066075	1279	0.0502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9070328	9088133	7	0.9026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9088304	9088443	2	3.2996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9095185	9819488	546	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9832514	9839018	16	0.6038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9839048	9847534	21	0.2065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9848059	9854053	6	-0.6551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9854996	9881191	34	0.0407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9881886	9883300	8	-1.2399
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9883724	28568467	13377	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	28568507	28569446	4	-1.5991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	28570034	34455255	3544	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	34455357	34501120	44	-0.5374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	34506267	63350429	16021	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	63352531	63354257	8	-0.912
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	63362225	68927029	3439	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	68937665	68970737	10	-0.8862
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	68977394	69027207	9	-0.0112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69043083	69187710	70	0.3788
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69188929	87195118	10831	0.0128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	87195415	87198968	19	-0.7651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	87199113	144963328	34597	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	144963496	145082649	44	0.4387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	145096123	162099591	10301	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	162099647	162104358	18	-0.8087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	162104369	165788632	2392	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	165796220	165812584	12	-0.9748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	165823548	172605017	4263	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172605106	172614033	11	-0.548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172614285	173224432	399	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	173224503	173226108	13	-1.7029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	173232554	191261904	12118	0.0184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	68532	738504	307	0.0702
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	738748	859336	42	0.7469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	862047	11214625	8773	0.0266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	11215636	11215771	3	-1.2205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	11220277	12868780	1090	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	12868865	12879650	10	-1.8657
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	12886857	46231871	20556	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46235191	46235192	2	-2.6491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46245056	46306865	15	-0.081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46307687	46309259	6	1.0398
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46313969	57344829	5070	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	57345175	57368673	37	-0.3838
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	57368712	155407683	60327	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	155409350	155415307	14	-0.7022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	155427828	160480733	3507	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	160482276	160485988	4	-1.4284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	160486719	175392693	10583	0.0252
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	175398295	175402113	2	-2.5057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	175402930	180304774	2543	0.0305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	180307090	180350709	21	0.5023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	180365831	180722926	171	0.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	94661	197772	97	-0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	198272	239286	23	0.4797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	239443	23850996	18115	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	23852651	23853409	2	-2.4532
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	23855711	29187260	3098	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	29192066	29269414	10	-1.2054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	29270819	31456179	1142	0.0442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	31456449	31456627	3	1.9574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	31459014	32539270	451	0.1194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32539530	32734596	71	0.6429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32758590	32798005	45	0.1402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32798775	32798808	3	2.0936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32798923	49039688	10373	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	49041029	49043038	3	-1.1426
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	49043159	54039110	3318	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	54039189	54039762	5	1.8407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	54039814	56370249	1492	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56375239	56375790	2	-2.0311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56376336	67740634	4545	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	67740780	67741252	3	-2.0413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	67744804	79019608	7255	0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	79025784	79091904	113	-0.8329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	79095953	103854114	15490	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	103854125	103858612	12	-0.5661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	103858628	124473473	12713	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	124477640	124512064	20	0.5071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	124512460	160952555	24244	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	160952709	160953273	5	1.1245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	160988032	170892930	7266	0.0223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	52911	908275	226	0.0581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	933725	1017032	25	0.3881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	1021043	11704215	7179	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	11704427	11712039	10	-0.7126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	11714189	38291966	20005	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	38292303	38299543	42	-0.2541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	38299560	54347867	11071	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	54353999	54354011	6	-0.9902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	54360982	104945292	25978	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	104947660	104953756	3	-1.9499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	104954012	109228865	2843	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	109229015	109241146	9	0.8881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	109241218	142154515	20477	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	142156294	142165614	27	0.7017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	142165684	158819765	10582	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	21254	585875	335	0.0637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	585892	585908	2	4.2
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	591043	6813262	7385	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	6813673	6814596	11	-0.6505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	6814609	7380351	187	0.1111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7380367	7385639	4	-0.5893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7385967	7775845	46	0.1973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7781474	7785109	5	1.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7789458	12285559	3357	0.0395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	12285662	12348483	37	-0.3088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	12348913	13677383	1145	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	13677478	13677655	2	-2.4574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	13678167	15445549	1634	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	15447431	15455979	8	-5.396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	15457818	25030393	7685	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	25030439	25040167	24	-0.7568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	25047021	39349816	9029	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	39354760	39506122	59	0.8041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	39507456	40891153	1075	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	40897009	40897628	2	-1.9563
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	40902837	85420544	24822	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	85425438	85431221	19	-0.7034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	85433237	89754011	2307	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	89759410	89782187	9	-1.4743
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	89785267	112360670	13809	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112363455	112364214	6	-0.9836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112364257	112364436	4	-2.9384
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112369457	125914488	8766	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	125916137	125916363	2	-1.5961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	125918795	138891505	9916	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	138892916	138894206	4	-1.4554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	138894952	146268959	4247	0.0459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	36587	51420	5	0.1784
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	53524	83270	4	-1.1932
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	84152	43177963	31350	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	43255666	44688654	99	-0.4016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	44691351	71998782	1920	-0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72000806	72002574	2	-1.3086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72003501	78744280	4815	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	78746701	78756684	5	-1.3556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	78756709	84566096	4047	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	84566391	84574064	9	-0.9474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	84581506	140211215	37636	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	62759	20890119	17039	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	20893207	20893509	3	-1.9793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	20893540	31286516	7254	0.0235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	31291340	31291732	9	-0.7197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	31291744	47241036	7637	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	47417400	47433407	3	-1.9939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	47468066	48391956	291	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	48457816	48460633	2	2.397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	48503408	66976282	12493	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	66977929	66984452	28	-1.9751
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	66992801	70952478	2552	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	70952492	70952848	4	-2.2228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	70961620	80921337	6685	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	80953273	81167477	14	-0.8336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	81184181	135356694	37053	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	188510	4924226	2477	0.0347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	4924693	4932947	33	0.5989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	4932965	5743981	794	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	5744656	5765715	32	-0.9147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	5765914	55119916	31322	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	55130608	55196566	47	-0.75
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	55198894	134449982	52439	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	20703	9521823	6206	0.0267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	9525137	9619559	24	1.1735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	9626236	19358279	6635	0.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	19366037	19468203	52	0.6679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	19471771	34122382	10554	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	34122683	34166673	22	-0.8176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	34167061	44190705	5026	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	44192107	44195804	3	-2.4145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	44199559	132288262	56530	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	13	17924949	114126499	64274	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	18072124	20029114	585	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	20029629	20069525	34	0.3819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	20073877	23528484	2319	0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	23528570	23528783	2	-1.9601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	23531694	40678108	10888	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	40680246	40727099	15	-0.8463
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	40739852	69087800	17840	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	69088121	69092479	10	-0.803
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	69092697	81567551	8211	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	81571615	81573462	2	-1.8331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	81577091	105609107	15229	0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105612798	105640508	14	0.8005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105645163	105848388	100	-0.0936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105854089	105873098	8	0.6787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105886988	105961853	38	0.0331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105964318	105989694	47	-0.7776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	105993576	106224218	133	-0.0488
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106231370	106236636	8	0.7083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106238011	106255229	14	0.2027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106255421	106296206	37	-0.1617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106301348	106356482	31	0.1178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	18276341	18454752	46	-0.143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	18463975	20232614	378	0.4677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	20302458	28157323	4671	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	28173703	28688170	111	-0.3324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	28700879	30299266	1069	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	30299512	30402593	15	-0.4748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	30402925	41772234	7311	0.0161
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	41775845	41811782	10	-0.6154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	41821390	74682253	20744	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	74682399	74682830	8	-0.9137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	74689234	82331721	4432	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	82331742	82338551	8	-0.8668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	82338871	100286563	13245	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	777	54354095	27328	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	54355723	54356280	3	2.3651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	54361849	76929109	14526	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	76929941	76942266	17	-2.5066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	76942502	77568114	838	0.0437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	77568674	77568753	2	-1.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	77568825	88815036	9796	0.043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	17	526	78643088	45297	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	18	1543	76116029	50794	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	41910	46685470	20021	0.0276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	46689181	46690571	2	1.5859
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	46692206	63789666	9338	0.0318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	9305	7645872	5811	0.0316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	7648108	7649127	4	-1.5175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	7649584	15249374	5836	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	15249902	15250374	3	-2.3981
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	15253258	62386512	30832	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	62425139	62426597	5	-0.5643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	9758742	31079990	12850	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	31083421	31089740	2	-1.612
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	31091010	39867514	6516	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	39867750	39884824	22	0.435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	39887197	43646685	3145	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	43652073	43661787	11	0.6865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	43666240	46921385	1853	0.0433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	14432528	37681412	15513	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	37693565	37705253	24	-0.5193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	37719574	41111567	1833	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	41114145	41222383	60	0.2683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	41222526	47654704	4897	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	47655927	47656546	2	-2.7291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	47659295	49581321	1235	0.1233
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	108477	41306484	25728	0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41318135	41323883	3	-1.4866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41324135	76251881	14396	0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	76266264	76461534	20	-0.8564
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	76462887	78275469	603	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78276864	78276992	2	-1.9855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78277167	115051983	20061	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	115052431	115064666	6	-2.2368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	115070447	154835548	23772	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	2710438	6161425	839	-2.7239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6167901	6373572	91	-3.8527
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6375579	6735272	107	-2.9747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6737619	6741479	5	-5.5518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6743347	14099670	2497	-3.1691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	14099736	14103917	3	-7.6945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	14104283	17543786	1822	-3.1685
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	17547696	17679836	58	-3.5924
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	17688729	17688934	3	-7.6439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	17691665	18014193	168	-3.2213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	18019303	19484001	699	-3.6958
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	19484450	22292291	1093	-3.2008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	22292909	24840062	558	-3.5858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	24840296	24883344	18	-2.1897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	24891476	25649572	97	-3.9843
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	25664067	26127678	97	-2.9698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26129939	26463416	140	-3.8166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26464490	26523696	29	-2.9149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26527268	26833326	83	-3.9533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26847504	57427647	183	-2.7907
