Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	1	3218610	48344945	23805	-0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	1	48348370	48364824	16	-0.7448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	1	48367240	247813706	105226	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	2	484222	242476062	131215	0.0075
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	3	2212571	165021836	89761	-0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	3	165022274	165022914	2	-1.5641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	3	165030679	197538677	16551	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	4	1053934	188763651	102660	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	5	914233	180360469	100431	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	6	1014281	51822407	30533	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	6	51822467	51864292	26	0.3876
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	6	51864473	170903919	65858	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	7	705284	158385118	81280	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	8	617667	14465597	6503	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	8	14465681	14467734	2	-1.5071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	8	14468121	145232496	74984	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	9	789932	140938752	67990	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	10	415240	38360711	25898	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	10	38370095	38370901	2	-1.3714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	10	38371212	135225087	54921	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	11	456120	95266482	51466	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	11	95267900	95269392	4	-1.0894
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	11	95271528	134142530	25743	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	12	889902	133161346	73895	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	13	19450806	114987458	56592	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	14	20501368	105988038	49403	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	15	23687685	101884307	44497	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	16	653459	27041776	12465	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	16	27042403	27044044	2	-1.7294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	16	27044069	89379936	28321	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	17	987221	80571505	36787	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	17	80571695	80571933	2	1.2447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	17	80572628	80917016	183	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	18	329586	77109240	42624	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	19	284018	34541469	13452	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	19	34545160	34583700	36	0.2721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	19	34583918	58878226	10460	-0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	20	455764	62219837	37275	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	21	15347621	47678774	20566	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	22	17423930	41539958	11692	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	22	41540155	41540662	2	-1.1847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	22	41540748	49331012	5227	-0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D11_802028	X	3157107	154905589	63713	0.0041
