Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	51598	72178	10	-0.2352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	72513	76204	5	-1.3597
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	88451	12768450	6501	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	12775335	13256851	58	-0.3603
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	13256970	16022502	1825	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	16026084	16027553	9	0.6925
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	16027597	25455928	5726	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	25465715	25534799	31	-1.1858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	25535897	34864261	4961	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	34875241	34877078	20	-0.5101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	34886855	70770030	22606	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	70770227	70770399	2	-1.6067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	70770533	72522941	1085	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	72528701	72535958	9	-1.2024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	72541006	72541504	3	0.2845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	72541524	72583721	44	0.7652
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	72583736	105814899	20940	-0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	105820728	105823898	17	0.7077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	105825578	110029038	2653	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	110034497	110041701	17	-0.6346
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	110044476	150822330	9989	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	150822391	150853164	32	-1.5773
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	150853200	151026302	172	-0.0066
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	151028547	151035324	37	-1.4285
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	151040529	173063028	14818	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	173063179	173068463	16	-0.7865
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	173068477	176928219	2512	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	176928488	176929121	4	-1.3157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	176929211	221087127	29859	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	221089546	221090392	3	-1.8051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	1	221093340	247191011	18113	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	2784	4183562	2984	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	4191739	4201042	36	-0.6569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	4201387	34554898	21012	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	34555087	34591060	45	-0.4863
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	34591536	37196192	1998	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	37201591	37206515	2	1.4619
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	37206628	52608369	10997	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	52608385	52635046	34	-0.4183
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	52641453	56855641	3086	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	56862385	56865307	3	-1.4148
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	56865801	87198249	18855	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	87214683	87962359	200	0.3648
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	87973022	89346332	646	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	89349583	89657286	28	0.3612
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	89660694	129354972	20187	-0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	129355244	129356785	13	-0.8172
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	129356799	137698618	4991	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	137700117	137700731	5	-1.0953
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	137701755	146578555	5447	-9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	146580874	146583404	24	-1.3746
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	2	146594276	242738129	58920	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	35345	45518229	32253	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	45520628	45524498	5	-1.0301
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	45530369	65163493	12953	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	65164275	65191783	59	-0.4873
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	65191802	68804017	2406	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	68804733	68830103	20	-0.61
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	68831448	85535654	10364	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	85540488	85591601	39	-1.1084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	85603605	100420474	5503	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	100427148	100432004	37	-0.6796
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	100432111	142552472	25753	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	142552895	142561089	6	-1.0194
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	142561970	143329524	420	0.016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	143333229	143336904	5	-0.8795
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	143341003	167100172	14564	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	167100623	167100726	2	-1.4847
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	167108895	194363281	17400	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	194363420	194365597	11	-1.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	194369129	196897393	1491	0.0085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	196903444	196960434	41	-0.4525
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	3	196964365	199380515	1169	-0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	2281	9819488	5792	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	9832514	9844105	32	-1.3877
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	9844264	34455370	16933	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	34455399	34501120	42	-0.6883
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	34506267	68943146	19392	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	68943659	68970737	6	-1.1423
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	68977394	69054598	12	-0.1982
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	69057536	69219747	70	0.5664
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	69222620	122493093	31974	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	122493594	122503619	27	-0.7614
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	122504005	130282201	4347	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	130286996	130287610	2	-2.3077
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	130292013	162099591	19237	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	162099647	162104408	20	-0.4798
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	162104417	172613549	6653	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	172613832	172614019	4	1.7508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	4	172614033	191261904	12478	-9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	68532	738504	307	0.0308
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	738748	832860	31	0.4888
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	832881	862806	13	-0.0906
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	870850	878653	14	-0.7951
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	886628	46306865	30324	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	46307687	46309259	6	-2.2192
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	46313969	59758639	6799	-0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	59758842	59808254	30	0.6668
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	59809236	68882059	5525	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	68903050	69153891	5	-0.9857
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	69269183	70775181	59	0.0308
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	70775196	70775731	2	-0.9481
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	70785501	72077087	806	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	72077167	72081006	2	-1.5342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	72081388	94231958	12937	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	94232470	94232808	2	-2.6019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	94235264	103879120	5660	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	103888272	103888503	4	1.2473
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	103888948	155409498	33336	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	155409576	155415307	12	-0.5532
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	5	155427828	180722926	16770	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	94661	239837	124	-0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	247306	330056	84	0.3086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	330687	29944454	21476	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	29944556	30026415	54	0.3686
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	30026432	32793528	1256	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	32793843	32798808	13	0.691
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	32798923	34045977	762	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	34046721	34050683	7	-2.4471
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	34052564	40472303	4151	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	40473579	40477271	6	-1.1856
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	40478477	54039026	8736	0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	54039043	54039814	8	-0.7147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	54043307	67064983	5437	0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	67065007	67105350	56	-0.7393
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	67106127	74648529	4980	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	74648586	74658138	11	0.5771
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	74660283	77071668	1464	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	77073620	77073646	3	-1.1588
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	77073713	79018769	1281	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	79018783	79089311	117	0.288
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	6	79091659	170892930	59521	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	52911	57538469	40357	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	57540053	57540580	3	-1.6107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	57540651	87503175	13931	-0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	87508677	87510328	17	-0.872
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	87510882	97233396	6211	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	97233398	97240411	15	-1.5257
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	97242176	102133551	2073	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	102134280	102160247	18	-0.4789
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	102162515	109221013	4514	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	109221021	109225010	18	-0.5339
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	109228153	109228480	9	-0.0994
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	109228865	109241146	10	-1.8945
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	109241218	125832210	9998	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	125832718	125834112	13	-0.6743
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	125834113	154020828	17740	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	154024104	154030546	4	-1.5463
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	7	154031763	158819765	3233	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	21254	585875	335	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	585892	585908	2	3.3442
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	591043	2067935	1148	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	2068619	2068760	3	-1.095
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	2068779	2689341	626	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	2690940	2691306	7	-0.9594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	2694578	7017400	5669	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	7021205	7836800	185	0.2408
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	7847301	12260380	3300	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	12261219	12463798	90	0.2708
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	12464038	25030494	10399	-0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	25031417	25040140	21	-2.2562
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	25040167	39349482	8986	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	39349816	39506122	59	0.5541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	39507456	112364214	41909	-0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	112364257	112364421	3	-1.8357
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	112364436	115703730	1823	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	115703829	115731957	38	-0.4978
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	8	115734562	146268959	21005	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	9	36587	22482889	19782	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	9	22491913	22492699	2	-3.1152
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	9	22499340	140211215	59864	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	62759	31286516	24182	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	31291340	31291891	13	-0.7535
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	31292415	45390058	7179	-0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	45392878	45408067	13	-0.5941
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	45408969	45632493	46	-0.0911
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	45905767	45931287	4	1.1105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	45947683	47241036	372	-0.046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	47417400	47433407	3	-1.9655
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	47468066	66976282	12751	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	66977929	66984436	27	0.5865
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	10	66984452	135356694	46195	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	188510	5744668	3298	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	5746177	5765715	30	-0.6368
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	5765914	55119916	31200	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	55130608	55187640	43	0.4706
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	55191703	99020267	26869	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	99025040	99070145	42	-0.9394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	11	99070312	134449982	25370	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	20703	9521823	6197	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	9525137	9619559	24	0.9614
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	9626236	11110690	1039	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	11111991	11132799	12	0.6053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	11143141	16310672	3686	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	16312254	16312592	2	-1.9659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	16319824	33185927	11831	-0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	33192673	33199627	28	-0.6401
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	12	33199654	132288262	61976	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	13	17924949	56656390	26010	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	13	56656627	56687715	31	-0.7091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	13	56688010	57482791	415	-0.0171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	13	57488282	57491273	4	-1.2969
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	13	57491347	114126499	37557	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	18072124	18776758	52	-0.0631
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	18801410	19492423	137	0.5112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	19493212	53688144	21530	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	53690398	53704090	9	-0.7685
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	53704585	73065527	12473	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	73070876	73099653	10	0.966
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	73099668	105867070	20873	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	105867273	105886988	7	0.813
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	105889602	105945406	32	-0.0699
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	105950876	106014879	61	-0.557
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	106019613	106171311	75	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	106171641	106171654	2	-1.4062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	106173280	106224218	47	0.0399
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	106231370	106247258	14	0.4708
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	14	106248976	106356482	76	0.0455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	18276341	18782353	78	0.0621
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	18792631	18801994	2	-1.4562
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	18809892	28289145	5022	0.0103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	28289164	28609050	97	-0.3326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	28675248	30299512	1070	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	30318608	30577010	34	-0.3058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	30583627	80840216	31618	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	80843133	80905894	7	-1.1667
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	80966604	95618862	10541	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	95618903	95633191	9	-1.0587
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	15	95634653	100286563	3425	0.0083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	777	2645983	895	0.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	2646796	2656938	10	0.5948
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	2661964	12613975	8607	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	12613988	12614003	3	-2.0834
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	12614014	19853151	3987	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	19853309	19874863	28	-0.603
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	19877755	22465812	1292	0.0103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	22466498	22606359	63	-0.3422
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	22608683	30554196	4595	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	30554774	30576013	4	-1.259
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	30576291	52015518	5771	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	52026888	52027308	3	-1.4254
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	52027430	54354011	2019	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	54354076	54379898	19	-0.7378
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	54379945	55317940	590	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	55318474	55323285	6	-0.8808
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	55324332	76929941	13859	-0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	76930112	76942938	18	0.61
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	16	76942983	88815036	10608	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	526	14241876	9038	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	14242741	14243546	2	-1.6021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	14244273	31461241	9310	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	31464091	31509204	36	0.4094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	31552238	35231067	1753	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	35234314	35240798	5	-0.9054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	35242575	36675234	779	0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	36676540	36686250	25	-0.3987
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	36686366	37307845	421	0.0135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	37309205	37311209	2	-1.2465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	37311500	41504511	2071	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	41504565	42044997	172	-0.3341
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	42046731	51514043	5812	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	51515913	51527590	26	-0.7073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	51527822	53567099	1525	0.0146
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	53567513	53569093	4	-5.2295
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	17	53572397	78643088	14214	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	18	1543	76116029	50605	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	41910	46052012	19620	-0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	46052210	46072786	28	-0.5539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	46083995	53758471	3827	-0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	53767071	53767271	3	1.0593
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	53767727	58427899	2555	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	58430797	58431307	2	-1.5387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	58431710	60964869	1422	3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	60969862	60974879	6	-0.8644
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	60978105	62719315	1252	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	62719564	62727041	3	-1.0643
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	19	62729922	63789666	590	-0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	9305	87419	63	0.0622
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	87576	87745	2	-1.8589
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	87801	1500457	1115	0.0209
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	1500503	1508999	22	-0.6326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	1509580	1541893	41	1.3096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	1545946	62022790	40948	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	62028993	62030083	2	-1.6723
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	20	62034232	62426597	184	0.042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	21	9758742	13869547	329	-0.0211
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	21	13870186	13889752	8	-0.7474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	21	13889850	46921385	23986	0.0034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	14432528	19280564	2303	-0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	19282909	19283319	2	-2.967
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	19286163	22601745	2277	0.0229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	22613016	22667949	32	-0.4446
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	22674422	22726814	20	0.692
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	22731529	48225625	18231	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	48233914	48293829	35	-0.7303
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	22	48294822	49581321	623	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	108477	38720352	24162	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	38720395	38720929	2	-1.7039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	38721545	47856008	4921	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	47860795	47864601	4	-1.1504
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	47865818	76270041	10886	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	76278683	76295047	2	1.5573
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	76295049	86536638	5428	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	86543323	86544152	2	-1.4048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	86545349	89781955	1679	-0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	89789954	89790001	3	-1.1447
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	89790154	89848662	21	0.0169
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	89850093	89856215	3	-1.6329
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	89862418	100208835	5588	-0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	100209402	100210956	3	-1.185
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	100213424	120888960	11404	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	120889219	120892837	3	-1.4486
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	120897739	121177478	151	0.0227
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	121179000	121179287	2	-1.6017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	121181977	150530342	17844	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	150534384	150541950	3	-1.5158
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	X	150542524	154835548	2107	0.0255
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	2710438	6095471	804	-2.2768
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	6099351	14099670	2734	-2.6457
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	14099736	14103917	3	-7.8018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	14104283	18080874	2075	-2.6932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	18084284	19547685	703	-3.1177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	19547873	22919906	1242	-2.674
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	22924247	24599413	316	-3.1134
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	24602438	25008090	93	-2.5475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	25014206	25649572	83	-3.5207
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	25664067	25938472	40	-2.2921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	25944418	26011215	22	-3.3136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	26013790	26129939	36	-2.2204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	26130472	26833326	251	-3.1568
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A03_1231052	Y	26847504	57427647	183	-2.4175
