Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	51598	12273021	6245	0.0269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	12276894	12278090	3	-1.362
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	12279675	12760427	261	-0.0387
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	12761331	13249076	57	0.5946
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	13249634	16878565	2184	0.0119
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	16884037	16890217	20	0.4921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	16902179	17063449	40	-0.0187
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	17067742	17134819	60	0.528
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	17134834	25455928	5264	0.0145
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	25465715	25550671	35	0.5792
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	25550949	72541006	28681	0.0072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	72541086	72583736	47	1.5388
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	72584492	103904311	19978	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	103904580	103960907	28	0.4783
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	103965022	104069745	27	-0.5029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	104104926	105820728	913	0.0131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	105820759	105823898	16	0.748
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	105825578	110028266	2648	-0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	110028493	110044476	23	-0.5492
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	110046521	112491849	1953	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	112497488	112498721	21	0.4218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	112498736	144823465	5623	0.0099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	144868049	144972536	17	-0.8368
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	144973250	147291432	724	0.0502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	147303148	147689083	160	-0.5325
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	147689241	151017346	1684	0.0276
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	151017366	151040529	49	0.379
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	151043379	151585677	434	0.0115
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	151587909	151634957	40	0.2956
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	151635025	159746062	4786	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	159763524	159915245	57	0.3683
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	159916999	167483561	5990	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	167500598	167508390	7	-2.3121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	167509025	241130701	50231	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	241130750	241289858	45	0.3064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	1	241294770	247191011	3753	0.0171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	2784	4183562	2985	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	4191739	4200578	35	-0.5616
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	4201042	34544573	21009	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	34552819	34591060	48	0.3733
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	34591536	52607972	12995	-0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	52607984	52634878	33	0.3981
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	52634901	89254947	22781	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	89258496	89408107	41	-0.5485
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	89572001	89680177	26	0.0885
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	89680209	89850229	84	-0.5858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	89850291	89881537	33	-0.9766
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	89884736	91017089	27	-0.4348
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	91017673	97484644	1023	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	97507179	97528621	9	-0.6981
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	97533310	117305056	11347	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	117306237	117306323	2	-2.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	117307715	146581653	18115	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	146581713	146583404	16	0.9471
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	2	146594276	242738129	58927	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	35345	131268899	82345	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	131268976	131288926	45	0.5873
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	131289614	163990962	20215	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	163995351	164098609	64	0.5579
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	164106536	194356501	19119	0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	194357441	194365582	20	0.6676
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	194365597	196757361	1482	0.0173
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	196760499	196932593	32	-0.3647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	3	196941179	199380515	1187	0.0658
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	2281	115394772	69917	0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	115394793	115401624	22	-1.2815
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	115403678	162171678	28010	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	162171863	162222716	42	0.5397
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	162226274	173225799	6958	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	173225875	173226108	9	-1.7061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	173232554	173659097	231	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	173661522	173665218	7	1.0836
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	4	173677707	191261904	11831	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	68532	738748	308	0.1123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	751371	862047	42	0.8296
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	862806	12868780	9830	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	12868865	12891533	13	-1.1036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	12902201	32138488	12090	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	32142841	32194212	39	0.9493
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	32206044	57357403	13443	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	57361784	57369290	32	2.0476
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	57374114	103879120	26734	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	103888272	103888503	4	-1.2053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	103888948	155407683	33344	0.0028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	155409350	155415152	12	-0.7349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	155415293	178989201	15820	0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	178991287	179037934	48	0.3492
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	179040803	180307129	714	0.0157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	180311316	180339836	12	-0.4098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	5	180346900	180722926	177	0.1176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	94661	765158	564	0.018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	766138	830843	63	0.2511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	831884	29989005	21083	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	29989237	30006876	6	-1.4795
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	30007656	31395201	660	0.0361
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	31395480	31417903	7	-1.1479
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	31425326	32539270	502	0.0949
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	32539530	32617454	24	-0.3929
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	32624906	54039110	13763	0.0071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	54039189	54039814	6	-1.2191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	54043307	68177985	6347	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	68182427	68211260	19	-1.0276
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	68216548	72919646	3025	0.011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	72923245	72925284	3	-1.5858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	72932043	79019608	3848	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	79025784	79091904	113	-0.4876
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	6	79095953	170892930	59517	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	52911	243383	92	0.1265
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	250149	253709	10	-0.7229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	256525	3361605	1321	0.0472
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	3361646	3361852	4	-0.8291
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	3365286	4280730	782	0.021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	4281593	4434776	140	0.5266
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	4443476	5845174	692	0.0643
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	5845422	5855549	8	0.67
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	5858515	26098182	15749	1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	26098815	26111938	5	-1.0738
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	26113744	64204392	22782	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	64206287	64233133	7	0.9059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	64274563	142154515	46004	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	142156294	142165914	29	0.8337
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	7	142176424	158819765	10547	0.0167
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	21254	7158228	7799	0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	7158507	7213846	26	0.5302
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	7225313	7781474	114	-0.045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	7783389	7785109	4	1.2605
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	7789458	12278622	3339	0.0264
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	12278669	12291857	32	-0.5051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	12305298	25028104	10446	-0.0052
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	25030360	25047044	29	0.3847
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	25047152	50670255	13296	-0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	50670446	50670887	3	-1.2906
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	50671465	115701219	39483	-0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	115703663	115719873	36	-0.435
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	8	115719963	146268959	21006	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	36587	28034704	23903	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	28037588	28040691	5	-1.2585
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	28045603	84566096	18193	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	84566391	84574064	9	-0.8347
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	84581506	105606318	14433	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	105608517	105609111	2	-2.6999
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	105610523	117494763	9096	0.0092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	117495648	117638192	103	-0.8995
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	9	117639541	140211215	13907	0.0088
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	62759	60998160	40505	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	60998175	60999944	3	-1.1823
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	61000303	66977957	4073	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	66978023	66984452	25	0.5716
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	66992801	124929018	38684	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	124931941	124932338	2	-2.6353
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	124935205	125122118	163	-0.0192
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	125124000	125124733	2	-1.7962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	125128092	134429879	6960	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	134440200	134515150	25	0.3446
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	10	134515319	135356694	353	0.0294
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	188510	4212705	1792	0.0247
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	4212876	4292454	24	-0.5
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	4292643	5739628	1476	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	5739688	5765715	37	-0.5375
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	5765914	6064366	239	-0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	6064845	6073419	4	-1.2163
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	6073590	21819917	11810	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	21820205	21825700	4	-1.1977
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	21825925	22426056	364	-0.0288
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	22428177	22429334	4	-1.5658
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	22429718	55119916	18778	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	55130608	55132856	8	-0.6126
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	55133074	55198894	40	-1.7349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	55200787	55201870	4	0.1871
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	55202521	55209585	7	-1.3786
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	55210152	85983461	17766	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	85983465	85983702	4	-1.2508
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	85992822	89127597	2109	-0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	89132526	89189872	12	0.6055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	89207189	91068290	1125	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	91069236	91077652	3	-1.2511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	91080021	107154020	11658	0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	107158953	107176811	16	0.5455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	107177255	134107001	19286	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	134107490	134108156	2	-3.2518
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	11	134113081	134449982	281	0.0903
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	20703	739459	418	0.085
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	739524	744290	16	-0.7647
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	745615	31893563	21411	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	31893680	31954269	59	0.7075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	31959169	44190705	6515	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	44192107	44195804	3	-2.2292
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	44199559	115797029	45385	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	115811237	115811535	2	-1.6071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	115811975	116593113	610	2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	116593285	116593794	2	-1.1859
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	116596743	130686200	9799	0.0171
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	130686539	130708284	16	0.5893
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	12	130708322	132288262	570	0.0635
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	17924949	36969135	13506	0.0102
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	36970036	36973965	4	-0.9135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	36974267	36982757	12	-2.0447
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	36986330	51969153	9862	0.013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	51972913	52015880	10	-0.7753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	13	52028474	114126499	40626	0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	18072124	18672674	43	0.0393
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	18674114	19080913	30	-0.3497
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	19107146	19270023	9	0.3747
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	19270221	19493212	108	-0.323
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	19494766	20028134	391	0.0128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	20028565	20058003	27	0.3325
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	20060059	21462823	933	0.0109
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	21462988	21463984	9	0.643
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	21464104	40678108	12231	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	40680246	40739852	16	-0.4665
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	40746090	69087800	17785	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	69088121	69092220	8	-2.4098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	69092466	73070876	2617	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	73076460	73099653	9	-1.3382
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	73099668	100628551	18680	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	100628996	100629279	2	-1.5089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	100630043	105170380	1930	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105174078	105238532	9	0.7542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105265522	105606340	133	0.092
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105609107	105632486	13	0.6584
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105638145	105854089	103	-0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105867070	105886988	8	0.7125
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105889602	105920279	18	-0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105920721	105989153	65	-0.4074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	105989694	106224211	133	-0.0355
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	106224218	106242821	13	0.5455
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	14	106245617	106356482	78	0.0322
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	15	18276341	22135297	1394	0.055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	15	22136089	22329984	94	0.599
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	15	22333360	74678566	32761	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	15	74678682	74679280	9	-2.0985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	15	74682119	100286563	17651	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	777	19853151	13498	0.0308
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	19853309	19878319	31	0.3977
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	19878366	34324072	6978	0.0265
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	34328205	34625512	174	0.3943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	34625748	72921524	17873	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	72922350	73024461	21	0.4337
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	16	73024612	88815036	13815	0.0252
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	526	16595026	10481	0.0236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	16598056	16682509	16	-0.5349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	16697872	18299671	920	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	18299674	18405311	26	0.6175
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	18405946	41560151	12047	0.0191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	41563921	41719947	94	0.6083
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	17	41750187	78643088	21617	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	18	1543	76116029	50609	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	41910	4368845	1174	0.0312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	4374831	4609904	59	0.291
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	4613110	5457659	365	0.0442
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	5461239	5466793	6	0.756
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	5468034	11024689	2684	0.0152
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	11029662	11030052	2	-1.5664
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	11038408	12553001	782	0.0268
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	12558366	12559102	2	-1.8656
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	12561523	48146458	15546	0.0169
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	48149894	48152831	2	-1.3961
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	48157011	56024079	3739	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	56024198	56025050	5	-0.9511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	56031019	56834742	556	0.0141
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	56836182	56840009	8	0.5032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	56846717	60974181	2526	0.0563
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	60974347	60974879	3	-2.5226
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	19	60978105	63789666	1846	0.028
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	20	9305	47607650	31694	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	20	47610582	47671844	40	0.3525
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	20	47672019	62426597	10645	0.0105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	9758742	24023840	7556	-0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	24027260	24163455	114	-0.8036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	24166326	32158326	5868	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	32159854	32161919	3	-1.916
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	32173420	41879385	7621	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	41879616	41879660	2	1.3056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	41882620	42427525	436	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	42427596	42432851	3	0.9489
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	42432971	43792481	957	0.0231
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	43795301	43797240	2	-1.8378
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	21	43798095	46921385	1763	0.0292
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	14432528	17004771	1189	0.0287
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	17006129	17009153	8	-0.9426
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	17010060	20815080	2110	0.1279
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	20815095	20815462	7	-0.6433
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	20815487	22601745	1270	0.0877
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	22613016	22662933	30	-0.4549
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	22667307	23419378	391	0.0372
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	23419492	23440876	22	0.3087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	23442325	36072938	9654	0.0144
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	36078675	36079892	4	-1.0999
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	36080613	40619263	2400	0.0153
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	40626614	40701500	39	0.3854
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	22	40705250	49581321	6404	0.03
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	108477	92632789	48327	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	92633786	92644083	4	-2.6345
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	92644643	110183856	9460	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	110183929	110187315	4	-1.5108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	110187683	114824651	2577	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	114827557	114827701	2	-2.4517
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	114831067	115177837	164	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	115177854	115178129	2	-2.1729
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	115184831	154582692	23561	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	X	154617249	154835548	18	-0.6836
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	2710438	12704495	2852	-2.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	12707867	12707977	3	-5.7167
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	12708562	18080874	2758	-2.0524
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	18084284	19488345	674	-2.2643
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	19488618	20185713	299	-2.0342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	20185776	20189645	2	-7.5751
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	20189975	24599413	1287	-2.0474
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	24602438	25040616	98	-1.7084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	25040759	25227402	36	-2.3501
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A09_1230918	Y	25234763	57427647	573	-1.9168
