Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	3208470	234965665	121623	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	234966641	234967160	7	-1.0932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	1	234968441	245880329	6829	-0.0213
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	474222	166107352	87101	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	166107713	166109742	3	-2.0702
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	166110185	174131807	5100	0.0128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	174141004	191320493	9163	-0.617
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	2	191320865	242124735	29314	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	526235	60623172	33261	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	61001391	61023621	31	-0.6288
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	61023705	119354381	30993	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	119354574	119355292	4	-1.0958
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	3	119360100	199023074	41630	0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	1043934	125678855	68741	0.005
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	125679801	125682385	3	-1.3129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	4	125682475	189836143	33483	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	967233	2133229	234	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	2134825	2142072	4	0.6537
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	2142369	74216965	38944	-0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	74219619	74221829	3	-1.1056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	74227881	76812137	1501	0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	76812448	76833681	11	0.5215
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	76839141	86022578	5086	-0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	86023007	137588611	28193	-0.6349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	137591882	178411004	25039	-0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	178416051	178416969	3	-1.2722
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	5	178419868	180293075	936	-0.068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	959281	12833827	8351	-0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	12834552	12834555	2	-2.2475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	12837251	15389693	1831	-0.0249
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	15391492	15391529	2	-1.9759
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	6	15396586	170745844	85840	0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	671810	3512951	1050	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	3513179	3816007	102	-1.0383
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	4022959	78849332	38633	0.0107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	78858919	78861123	2	-1.4541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	7	78861313	158077879	41182	0.018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	8	607667	145304484	81198	0.404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	779932	101952541	44427	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	101953767	101954090	2	-1.3402
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	9	101954182	140058573	23297	-0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	405240	19871964	13744	-0.0166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	19872053	19876221	2	-2.0406
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	19876843	63086566	22448	-0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	63091776	63830524	460	-0.5754
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	63830856	89408710	15140	-0.015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	89418974	90875252	1113	-0.569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	90879497	96265781	3119	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	96266840	97627798	748	-0.6072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	97638133	114310986	10209	-0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	114316005	114929728	389	-0.6479
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	114930237	118521846	2512	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	118527087	119275568	461	-0.6842
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	119287813	123928822	3528	-0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	123932772	124139342	172	-0.6439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	10	124139573	135075077	6457	-0.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	446120	45111929	28399	-0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	45111987	45147480	27	0.4269
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	11	45152981	133647740	48499	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	760163	10034164	4986	4e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	10034765	10034870	2	-1.3962
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	10038871	42983639	17439	0.0224
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	42986682	44113774	633	-0.6252
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	44114351	72528020	16329	0.0238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	72531814	72533182	2	-1.4439
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	72535555	73465688	474	0.0394
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	73472179	73472581	3	-1.0821
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	12	73473967	131671419	33768	0.0101
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	18348806	99987314	47320	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	99991311	100130717	64	-0.7188
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	100131860	100379001	178	-0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	100379062	100408655	47	0.4128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	13	100412645	114005560	8736	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	19571208	79269033	33725	0.0035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	79276604	79276946	2	-1.4731
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	14	79279690	105059083	15502	-0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	21238778	70339365	27748	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	70339426	71101300	403	0.3246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	71101918	91446759	11507	-0.0089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	91446830	92086239	34	0.2659
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	15	92086249	99701830	4661	-0.0118
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	593460	76741245	33199	-0.0246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	76743768	76841189	102	-0.6703
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	16	76842313	87907437	7420	-0.0198
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	17	933971	78510305	36880	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	319586	50391904	28787	-0.0062
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	50394244	50421143	14	0.5865
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	18	50421325	75210228	13648	-0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	235018	49541720	18174	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	49543974	49548631	2	-1.2691
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	19	49548899	63570038	5718	0.0349
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	403764	15439394	9183	-0.0044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	15441765	15650518	226	0.4478
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	20	15650907	61690281	27743	-0.0162
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	14269492	31245309	10692	-0.2462
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	31245996	31246372	2	-2.1089
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	21	31246840	46503202	9800	-0.2555
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	22	15803930	47717016	16881	-0.024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	3167107	38206505	15546	0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	38206964	38310495	87	0.2503
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_D04_1230964	X	38320850	154558783	47831	6e-04
