Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	61735	35091674	19164	0.0073
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	35102654	35114268	21	-0.6422
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	35115542	72762676	23869	0.0024
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	72763370	72811133	48	0.8308
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	72811148	76050815	1930	0.0139
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	76050844	76054854	3	-1.7092
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	76059509	106013376	19099	0.0072
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	106019205	106022375	17	-1.4997
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	106024055	144842558	9911	0.0017
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	144849539	144849552	3	1.4452
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	144865627	149242725	1245	0.0167
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	149243072	149254920	20	0.5708
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	149256691	152555527	1529	0.0067
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	152555706	152586540	33	-1.422
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	152586576	152763069	193	0.0291
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	152767467	152768700	17	-0.4639
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	152773905	155180360	1344	-0.0145
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	155180466	155201064	12	-0.9194
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	155211667	157788270	1403	0.0071
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	157788504	157788550	2	-1.3728
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	157788760	161479438	2511	0.0073
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	161496900	161637210	50	0.3006
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	161637868	169216937	6017	0.0115
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	169233974	169241766	7	-1.6628
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	169242401	174440956	3340	0.004
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	174442449	174443654	2	-1.4385
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	174444480	174796556	183	-0.0078
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	174796699	174801737	14	-0.5659
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	174801840	187715854	8689	0.0011
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	187717560	187721369	2	1.5272
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	187724610	189648157	1231	0.012
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	189648483	189648527	2	-1.4567
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	189652047	196727850	4736	0.0093
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	196731035	196801850	89	0.3459
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	196801987	243059774	32142	0.0071
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	243062601	243085660	19	0.4936
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	1	243085676	249224388	3798	0.033
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	12784	3732546	2573	0.0291
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	3732587	3733273	3	-1.1462
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	3736538	12681835	7080	0.0047
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	12685369	12696236	11	-0.8978
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	12697043	34520473	14343	0.0066
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	34523978	34525580	2	-1.7216
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	34525967	50878169	11901	0.0059
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	50879012	50948419	64	-0.9894
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	50955025	52741737	1224	0.0223
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	52743925	52781542	41	0.584
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	52787949	56987366	3092	0.0095
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	56987383	57022456	12	-0.7468
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	57022642	86937687	18839	0.0058
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	86953070	86953854	2	-1.8625
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	86970406	87337969	84	-0.0209
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	87344738	87974463	185	-0.4889
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	87994641	110462496	9579	0.0051
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	110467473	110477250	2	1.9136
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	110501512	115536316	2453	-0.006
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	115536359	115542070	21	-0.5937
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	115542270	133819875	11105	0.0118
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	133823842	133838788	15	-0.8482
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	133839373	184085453	31134	0.0024
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	184085788	184089724	9	-0.9784
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	184093998	193768309	5610	0.0137
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	193771604	193875281	44	0.3017
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	2	193875945	243089456	30617	0.0051
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	60345	8821804	7753	0.0248
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	8825367	8856583	26	0.43
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	8857028	26601100	12283	0.0071
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	26601760	26611885	9	-1.062
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	26611898	26612166	7	0.2962
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	26613201	26614985	9	-1.1266
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	26615949	68732028	27788	0.0064
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	68746164	68748758	16	1.0506
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	68748786	75421170	4873	0.0033
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	75427107	75560545	60	-0.6601
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	75561141	129785940	29803	0.0046
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	129786209	129808276	49	0.2894
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	129808555	162513092	20291	0.0046
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	162513149	162626603	69	0.5975
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	162628614	192878045	19192	0.0054
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	192878195	192882903	17	-1.0321
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	3	192886435	197896118	2707	0.0183
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	12281	5162491	2512	0.0013
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	5165055	5179702	12	-0.6835
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	5181189	9456977	2728	-0.0024
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	9461230	9479345	9	-0.6746
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	9486087	10210390	545	-0.0029
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	10223416	10235268	35	1.1626
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	10236142	10392354	172	-0.0212
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	10393154	10400668	14	-1.7708
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	10402718	34787149	16807	0.0093
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	34787163	34824183	33	0.4789
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	34824725	69374955	19503	0.008
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	69375160	69485979	63	-1.3185
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	69489335	115013043	27648	0.0035
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	115013132	115013403	2	-1.6781
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	115014692	115173700	102	0.0528
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	115175323	115184266	26	0.6898
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	115184310	138092103	13247	0.0031
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	138092195	138092907	11	-0.7195
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	138092926	161880712	14785	0.0066
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	161880812	161884584	10	0.6849
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	161884600	172987736	7086	0.006
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	172987827	173000821	19	0.5333
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	173001831	189221258	10939	0.0099
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	189221360	189221424	3	2.0464
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	4	189221439	191027923	1177	0.0448
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	15532	779860	337	0.0488
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	779881	863797	30	-0.4324
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	866370	12819313	9858	0.0094
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	12819375	12838533	11	-1.069
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	12849201	15719350	1978	0.0108
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	15720075	15720597	9	-0.959
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	15723346	21451277	3552	0.0068
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	21451964	21452438	3	1.1694
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	21452496	23101846	904	-0.0076
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	23111670	23111874	2	-1.4239
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	23115228	46271930	14122	0.0015
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	46272521	46273502	5	-1.54
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	46278212	106227527	33388	0.0074
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	106229673	106233100	19	-0.6867
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	106233117	175460087	46170	-5e-04
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	175465689	175469507	2	-2.7331
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	175470324	177198449	729	0.0056
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	177227551	177254965	4	1.3287
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	5	177259415	180790320	2003	0.0061
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	149661	257353	102	0.0274
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	258265	303121	25	0.6253
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	314962	343103	21	-0.0241
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	343144	384521	58	0.2611
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	384546	9795017	7594	0.0129
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	9795062	9795882	2	-1.2693
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	9796162	23060991	9933	0.0048
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	23060995	23064254	3	-1.1801
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	23067645	26737457	2546	-0.0056
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	26738777	26799966	34	-0.3817
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	26813083	29837072	1424	-0.0049
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	29837187	29901576	37	0.3651
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	29908469	31277686	651	0.0022
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	31280823	31296451	12	1.015
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	31309924	32501299	525	0.0157
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	32508476	32527284	6	-1.3938
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	32530144	32622194	39	0.1026
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	32624304	32650612	7	-0.8174
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	32654640	53931275	13744	0.0051
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	53931380	53935415	6	1.0539
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	53935698	67011007	5463	0.0076
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	67011378	67049599	54	0.3152
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	67051202	67206939	132	0.021
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	67207558	67212912	4	-1.3157
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	67212998	74591858	4865	-0.002
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	74592225	74594563	5	1.2396
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	74594734	77436532	1774	0.0033
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	77439868	77467931	23	-0.3765
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	77468466	78962889	978	0.0082
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	78969065	79039234	111	-1.8839
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	79041633	124431774	28235	0.0061
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	124435941	124470761	21	0.5745
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	124471533	161032565	24255	0.0064
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	161032719	161033283	5	0.9012
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	6	161068042	171051005	7266	0.0195
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	7	43355	141763124	87420	0.0065
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	7	141769643	141797564	44	-0.5077
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	7	141798990	142474939	449	0.0994
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	7	142476719	142486045	27	0.9246
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	7	142486115	159127004	10579	0.007
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	31254	563371	310	0.0523
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	571611	595875	25	0.4134
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	595892	595908	2	3.4618
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	601043	3787060	3101	0.0139
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	3787083	3790106	23	-0.6378
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	3791218	4002192	329	0.0236
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	4002207	4002316	3	-1.2407
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	4002653	4003305	10	0.0235
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	4003463	4003478	2	-2.3492
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	4003561	6840297	3930	0.0306
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	6858815	6876142	4	-1.1644
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	6878188	8092025	336	-0.0209
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	8093182	8146011	58	0.473
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	8147999	11893228	3162	0.0304
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	11895245	12001123	9	-0.7559
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	12034307	13553605	1101	0.0126
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	13554291	13600391	62	-0.9268
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	13600446	14909013	1298	0.0034
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	14909285	14909339	2	-1.7029
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	14910045	24975500	8082	0.0067
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	24975570	24984069	17	0.9165
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	24984141	39230659	9045	0.0043
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	39235603	39386965	58	-1.7969
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	39388299	40184550	599	0.0013
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	40184742	40189438	19	0.4758
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	40189453	48167435	2447	0.0032
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	48169244	48235264	20	0.4561
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	48239172	58115275	6112	-1e-04
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	58116550	58130025	5	-1.0568
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	58132798	58343334	157	0.035
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	58344032	58348977	6	0.8194
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	58348997	62610307	2915	0.0076
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	62611601	62611754	2	-1.4458
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	62616277	72212365	5637	0.0012
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	72215311	72216599	9	0.843
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	72219863	112291352	24131	0.0083
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	112291494	112295260	11	0.6602
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	112300281	137681619	17756	0.0021
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	137682359	137862195	172	-0.8325
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	8	137862416	146298155	5002	0.0098
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	46587	23361805	20457	0.0134
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	23363115	23373484	8	0.9067
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	23378488	98250198	30733	0.0048
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	98250231	98250958	4	1.2379
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	98253654	112976872	10642	0.0082
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	112976907	113024442	29	-0.2462
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	113024789	113028169	2	-1.7095
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	9	113032431	141091394	18058	0.0046
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	72759	24377674	19250	0.0086
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	24377675	24378054	10	-1.9969
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	24378908	31246510	5044	0.0026
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	31251334	31253000	15	0.4745
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	31253106	43054690	5055	0.0015
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	43056810	43064148	9	-0.8224
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	43064246	46989747	2252	-0.0103
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	46989884	47414281	124	0.2147
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	47419711	47771030	193	0.0099
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	47897394	47913401	3	-1.4208
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	47948060	67307951	12796	0.0158
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	67308017	67314430	24	-0.4373
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	67314446	67357993	46	-0.0508
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	67358741	67361914	3	-1.2013
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	10	67362181	135506704	46285	0.0049
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	198510	42813151	30018	0.0043
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	42816486	42818039	2	-2.0168
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	42820603	132823558	55521	0.0046
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	132824090	132826084	5	0.5161
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	132827995	133111500	246	0.1079
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	133111661	133119503	8	0.6678
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	11	133120937	134944770	1345	0.0514
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	150442	865970	418	0.0447
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	869109	874029	18	-0.5659
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	875354	11220724	6836	0.0107
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	11220827	11241532	11	-1.0031
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	11251874	11503942	130	0.0438
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	11503975	11543386	33	0.5288
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	11543406	45899825	21079	0.0082
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	45904438	45909537	4	-1.4169
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	45913292	75298459	17935	0.0076
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	75298553	75300405	2	-1.5015
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	12	75300518	133778189	38609	0.0066
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	19026949	23629187	2896	0.0153
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	23629210	23633515	13	-0.617
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	23638195	32532121	6738	0.0094
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	32532622	32538423	18	-2.2268
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	32540047	67071042	22029	0.0101
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	67073076	67078989	5	1.3667
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	67079347	70734552	2343	0.0149
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	70736064	70772895	48	-0.7399
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	70775771	72476988	1062	0.0116
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	72477555	72480556	4	-2.5064
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	13	72480605	115108397	29145	0.0107
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	19002124	19607007	45	-0.0393
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	19620051	19844107	18	0.7943
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	19846877	20200183	19	0.3175
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	20200381	20424926	109	1.0959
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	20425509	41628229	13643	0.0105
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	41628474	41657249	10	-0.5655
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	41657349	63775602	14034	0.0043
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	63775684	63864897	72	0.5368
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	63865925	106460902	27180	0.0064
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106479675	106482296	4	-1.3846
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106487040	106538062	23	0.0635
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106541753	106561441	12	0.9252
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106567100	106715330	66	0.1665
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106715489	106727469	9	-0.7061
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106728162	106751284	10	0.0024
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106753859	106753867	3	1.2109
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106754003	106872062	54	-0.0067
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106874361	106918649	53	-0.5152
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	14	106922531	107285437	223	0.0698
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	15	20016328	76878362	34356	0.009
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	15	76891241	76895775	22	-1.5954
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	15	76902179	102469040	17687	0.0129
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	60777	6350806	3497	0.0091
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	6352054	6382728	35	-0.9949
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	6385171	19944000	9995	0.0155
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	19944363	19965875	29	-0.4553
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	19967362	32482955	6583	0.0128
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32483006	32588622	23	0.2858
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32588901	32588909	5	1.134
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32609274	32655523	25	0.4649
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32743289	32848904	18	-0.0227
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32848905	32872275	4	0.8967
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	32873293	33241953	30	-0.0701
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	33300894	33631830	89	0.3848
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	33643399	78371608	21439	0.0031
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	78372440	78383140	15	-1.7894
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	16	78384738	90287535	10645	0.0158
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	17	526	54159044	29495	0.0092
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	17	54160914	54172823	28	-0.9568
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	17	54173247	81049726	15783	0.0096
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	11543	24365863	13919	0.0132
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	24365915	24366145	3	-1.8713
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	24366379	40051678	10154	0.0057
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	40056569	40057767	25	-1.4816
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	40058395	63200076	15896	0.002
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	63200357	63207273	24	0.556
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	63207381	66485750	2398	0.0258
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	66489787	66491583	2	-1.7225
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	18	66491948	78015057	8400	0.0215
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	19	90910	59097854	29348	0.0065
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	61305	1560951	1206	0.0309
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	1560999	1593849	41	2.0352
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	1593893	3691584	1516	0.0127
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	3696808	3698496	3	-1.5259
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	3701132	26280601	17289	0.0077
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	26288307	29538310	37	-0.3973
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	29539691	50647593	13416	0.0037
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	50652797	50654400	4	-1.1481
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	20	50654576	62956153	8998	0.012
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	21	10736871	44968053	22646	0.0069
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	21	44970873	44972812	2	-2.2306
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	21	44973667	48096957	1763	0.0264
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	16052528	16399151	54	0.3308
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	16402835	24288367	4541	0.0106
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	24288434	24344422	28	-0.616
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	24350529	24396814	19	0.925
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	24401529	41145604	11753	0.0025
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	41147325	41152031	3	-1.7593
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	41153176	42910769	1043	-0.0095
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	42913069	42934462	15	0.5502
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	22	42942962	51234455	6112	0.0047
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	168477	7559491	3804	-0.0046
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	7559994	7561105	3	1.9455
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	7561177	8374655	609	0.0061
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	8374722	8376862	4	-2.8418
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	8377156	100125688	48290	0.0071
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	100130437	100135568	5	2.1648
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	100135614	101054693	503	-0.034
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	101055873	101056256	2	-2.9313
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	101056645	120377156	10605	0.0076
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	120377239	120377928	2	-4.0705
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	120379134	139997474	11324	0.0013
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	140002301	140005763	4	-2.6187
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	X	140005895	155182354	9264	0.0085
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	Y	2650438	27466078	8121	-0.9332
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	Y	27467181	27472447	2	-2.6761
AVANT_p_TCGA_180_SNP_4N_GenomeWideSNP_6_A07_895474	Y	27480360	59018259	510	-0.9789
