Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	51598	16878321	8764	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	16878363	17133798	116	0.4276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	17133835	20755790	2552	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	20756009	20756403	4	-0.9413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	20757528	25050918	2425	-0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	25052966	25053832	3	-1.3762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	25056738	25455928	291	0.0175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	25465715	25519573	28	-1.7341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	25534088	72541504	28762	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	72541524	72583736	45	-1.3752
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	72584492	103904311	20059	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	103904580	104060967	52	0.3959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	104061555	110020531	3587	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	110021609	110029038	19	0.665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	110034497	110044476	18	1.8922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	110046521	112491849	1956	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	112497488	112498535	18	0.4511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	112498697	150822330	8049	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	150822391	150853200	33	-0.9802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	150853218	151026302	172	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	151028547	151035324	37	0.56
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	151040529	153447090	1344	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	153455784	153467688	10	-0.8325
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	153478291	159780383	3920	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	159784563	159904580	44	-0.6004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	159904825	163658006	3042	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	163658575	163659253	3	-1.3055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	163660469	163771676	153	0.0347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	163772128	163772373	4	-0.8152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	163773444	167483561	2813	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	167500598	167521501	9	0.6789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	167522026	173063028	3523	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	173063179	173068477	17	-0.9447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	173068495	177590361	3077	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	177597151	177599938	4	-0.9915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	177605829	180629457	2061	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	180630042	180630326	2	-1.3242
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	180632901	192714857	8054	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	192718034	192721641	2	-1.5575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	192723639	194998709	1458	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	195005246	195024743	33	-0.7134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	195024772	195057666	33	-0.1961
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	195065188	195068407	18	-0.6613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	195068428	246804070	35773	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	246815817	246863836	33	-0.8682
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	1	246875180	247191011	144	0.0306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	2784	2117692	1387	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	2121919	2133014	7	-0.9056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	2134402	4178544	1590	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	4181062	4201042	39	-0.5349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	4201387	33986473	20631	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	33988648	33990227	6	-0.8821
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	33990746	34544573	440	-0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	34552819	34594261	50	0.3833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	34594303	41091739	4824	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	41091947	41099391	23	-0.6082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	41104737	52607972	8191	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	52607984	52634901	34	-0.7459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	52634916	87542730	22156	-0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	87544412	87546133	2	-1.6585
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	87547340	97520697	1927	0.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	97523704	97528142	3	-1.9901
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	97528621	126158693	17091	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	126168121	126168383	2	-2.7112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	126168402	183793698	35324	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	183794033	183797969	9	-1.144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	183802243	208063200	14111	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	208063423	208067581	16	-1.0448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	208067721	229465250	13886	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	229467723	229468157	8	-1.1066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	229468327	238063007	5603	-0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	238063247	238063261	2	-2.0708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	2	238065441	242738129	2635	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	35345	52998251	35785	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	53003415	53014156	37	-0.6541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	53014257	68828854	12030	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	68828949	68830103	14	-1.6508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	68831448	75609895	4918	-0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	75613585	75871149	76	0.2268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	75874746	100420474	10961	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	100427148	100431991	35	0.4934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	100431998	131245549	18745	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	131246388	131288926	52	-1.2198
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	131289614	133189386	1172	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	133190847	133197689	3	-1.7245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	133200664	164023184	19130	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	164028410	164108689	48	0.6622
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	164109266	196897393	20697	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	196903444	196959853	40	0.4932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	196960434	199322610	1151	-0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	3	199322735	199380515	23	0.5078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	2281	9819488	5802	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	9823258	9844264	34	1.1252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	9844280	9999813	172	-0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	10001452	10009766	16	-2.6777
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	10011816	25441288	11224	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	25441487	25446737	3	-1.6435
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	25456356	34455399	5575	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	34455420	34500578	40	-0.4132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	34501120	57743950	12557	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	57746405	57795328	39	0.6639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	57797181	64376535	3993	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	64380064	64388380	20	-0.7298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	64390176	64390853	8	-2.9746
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	64399026	69057536	2879	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	69057550	69219747	70	-0.3816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	69222620	140217931	42381	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	140225435	140226130	9	-1.0754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	140226422	162099647	13399	-0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	162099753	162104358	17	-0.8031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	162104369	173224432	7083	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	173224503	173226108	13	0.833
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	173232554	183982315	7262	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	183983481	183996044	3	-1.3314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	183998421	190526909	4515	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	190527272	190535291	9	-0.6337
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	4	190535616	191261904	330	0.0677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	68532	12868780	10218	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	12868865	12879650	10	0.9713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	12886857	17644656	3188	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	17644832	17650871	10	-0.8754
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	17651343	57364872	22470	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	57365287	57368673	24	-0.665
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	57368712	151494364	57664	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	151495579	151498544	14	-0.9277
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	5	151500464	180722926	19501	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	94661	199283	101	-0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	202353	288144	48	0.5784
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	288505	311333	45	0.2353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	318453	326149	8	0.5122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	327559	23850996	18028	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	23852651	23853409	2	-2.8836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	23855711	26840385	2043	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	26845011	26876548	25	-0.7168
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	26881042	29945051	1435	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	29945166	29958359	20	0.8326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	29979615	30007656	13	0.031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	30009543	30009555	4	0.973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	30016448	31385665	651	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	31388802	31403932	9	-1.6586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	31403966	32616454	527	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	32617261	32686060	21	-0.7192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	32686948	32732282	22	-0.0878
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	32732569	32734596	5	-1.8053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	32758590	54039110	13747	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	54039189	54039814	6	1.5502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	54043307	58166573	2314	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	58166637	58178610	6	-0.8384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	58179336	58530601	96	0.1025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	58534011	58535028	5	-0.9317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	58540533	65393663	1933	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	65404265	65405713	2	-2.4876
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	65407497	67090469	1135	0.0154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	67090488	67100226	16	0.4785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	67100610	74648586	5015	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	74648953	74658138	10	0.8253
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	74660283	77485308	1762	-0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	77485918	77509408	26	0.3638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	77509476	79028500	984	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	79028521	79091746	105	0.2722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	79091893	80860992	1123	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	80861133	80861367	2	-1.0796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	80861405	81014661	78	-0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	81015634	81016631	4	0.6652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	81017185	81340908	226	-0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	81340962	81346253	32	-0.8421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	81351060	103841522	14024	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	103844669	103868754	46	-1.2
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	103872163	115302149	7254	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	115309225	115309483	4	-1.3818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	115312969	128470246	7835	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	128474123	128478108	7	-0.9868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	128481507	157699483	19697	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	157701252	157716064	3	-1.5802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	157716982	158904669	751	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	158908133	158912622	3	-0.9667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	158913155	160952555	1412	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	160952709	160953273	5	1.3613
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	160988032	161610111	457	0.0324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	161612276	161734297	71	0.6085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	6	161736663	170892930	6734	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	52911	22401305	16099	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	22401997	22403012	2	-3.2232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	22405279	38353968	11451	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	38357890	38364572	5	-1.2734
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	38367482	66278809	14908	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	66280046	66282667	4	-2.3453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	66285074	66328006	14	-0.1567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	66332543	66336369	2	-2.2042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	66337219	70058374	2383	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	70061186	70064077	2	1.7112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	70066179	109221034	22500	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	109224328	109224911	11	-0.8581
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	109224913	109228448	13	0.213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	109228480	109241146	11	-2.3724
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	109241218	141409593	19988	-0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	141416112	141438576	42	-0.5289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	141441750	142154515	451	0.0653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	142156294	142165914	29	0.95
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	142176424	142928980	469	0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	142929090	143029152	32	-0.4447
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	143039363	143075149	19	0.146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	143075464	143198992	50	-0.3352
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	143203099	152778571	5887	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	152778578	152778645	2	-2.5003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	7	152778648	158819765	4112	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	21254	5581675	6095	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	5586134	5591903	27	-0.9411
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	5594496	7225429	1734	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	7237790	8150761	232	0.2011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	8150980	8321077	167	-0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	8324455	8328767	6	-0.8037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	8329155	12285662	3073	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	12285876	12595821	108	0.2645
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	12595989	25028104	10402	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	25030360	25047021	28	-0.3874
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	25047044	39380038	9035	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	39380154	39420949	15	-0.5656
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	39422583	40891153	1105	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	40897009	40897628	2	-2.3344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	40902837	100004393	33538	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	100005327	100005461	2	-1.5217
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	100009353	112360670	7428	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	112363455	112364436	10	1.2077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	112369457	144796206	22422	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	144796613	144797099	2	-1.7467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	144798796	145870788	306	-0.0557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	145871352	145874898	2	-1.3458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	8	145889935	146268959	194	0.0295
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	36587	5374069	5493	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	5375783	5388011	20	-1.0745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	5396118	6685986	873	-0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	6691145	6698357	7	-1.0698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	6702314	23351805	14062	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	23353115	23363484	8	-2.0875
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	23368488	44569219	11006	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	44667855	44813196	38	-1.0999
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	44815938	78744280	6709	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	78746701	78749156	4	-1.4011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	78756684	105606318	18530	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	105608517	105609111	2	-3.4677
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	105610523	116122632	8027	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	116127223	116128143	2	1.9206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	116132850	137351189	14011	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	137353926	137355443	2	-1.66
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	9	137356233	140211215	1115	-0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	62759	3365666	2772	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	3366744	3368262	3	-1.3269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	3370150	42844634	26868	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	42844707	42845748	2	-2.8539
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	42846029	46475717	2000	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	46478798	46482317	23	0.5086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	46482420	47015694	75	-0.0292
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	47015897	47122809	109	0.6428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	47127682	47241036	80	0.0877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	47417400	47468066	4	-1.4153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	47480482	135084182	58973	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	135092863	135227268	110	0.6849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	10	135237230	135356694	37	0.2022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	188510	227612	21	-0.0736
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	231489	232112	2	-1.6686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	232209	4924226	2454	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	4924693	4933468	42	0.671
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	4933483	5743981	785	-0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	5744656	5766037	34	0.6073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	5768936	6057431	231	0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	6058422	6079079	17	0.3937
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	6080464	24398750	13600	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	24400825	24406833	6	-1.1261
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	24411752	48554998	16233	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	48558010	48559252	2	-1.6107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	48562894	55119916	1224	0.0334
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	55130608	55198894	48	-0.5762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	55200787	55201564	3	0.3619
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	55201870	55217259	10	-0.6408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	55217364	91420951	21307	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	91421460	91421486	2	-1.7436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	91421752	134106222	30817	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	134107001	134126364	27	-0.3213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	11	134126402	134449982	259	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	20703	2106150	1265	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	2116123	2128284	41	-0.8554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	2128365	8235228	4238	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	8237875	8285644	16	0.43
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	8293101	9518505	637	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	9521823	9619559	25	1.0541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	9626236	9628444	6	-0.4554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	9628505	11105412	1034	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	11106639	11122722	9	-0.5702
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	11124185	11132799	5	-1.7137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	11143141	50991165	24977	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	50991258	50992553	2	-1.7589
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	50997642	73465688	14119	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	73472179	73472581	3	-1.2134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	73473967	89007481	9413	-0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	89015800	89016205	7	0.8973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	89017688	103905238	10108	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	103908106	103908134	2	-1.6517
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	103909029	121954358	11653	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	121956946	121992692	15	1.0897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	121995138	122044680	10	0.6911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	122058065	128566514	5072	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	128566539	128569547	3	-2.1416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	12	128569723	132288262	2374	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	17924949	19019459	567	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	19021895	19021910	2	1.4564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	19022501	36970036	12995	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	36970224	36986808	20	-0.4641
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	36986921	57482791	12985	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	57488282	57495031	6	-0.9648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	57500053	64249190	4066	-0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	64250132	64251496	3	-2.7947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	64254284	71374989	4511	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	71375556	71378557	4	-1.8573
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	13	71378606	114126499	29131	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	18072124	18492533	29	0.1191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	18502799	19494766	162	0.4747
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	19495349	105598011	54948	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105601409	105638145	18	0.8626
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105640508	105786534	66	0.15
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105788401	105798514	8	-0.4072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105799207	105822329	10	0.1149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105824904	105824912	3	-1.534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105825048	105854089	15	0.1482
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105867070	105873098	7	-1.7215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105886988	105945406	33	0.0311
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105950876	105989153	51	-0.5461
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	14	105989694	106356482	224	0.0731
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	18276341	30297184	6266	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	30297384	30326829	10	0.9023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	30333650	32458294	1524	-0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	32458416	32618236	81	0.2191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	32643110	67116869	22207	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	67118339	67118414	2	1.4923
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	67124729	74140748	3944	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	74142755	74142777	2	-1.7418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	74144748	80865645	3990	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	80880206	80981571	8	0.6981
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	80995370	82331721	761	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	82331742	82338551	8	-0.8586
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	15	82338871	100286563	13241	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	777	16285163	11782	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	16420592	16420780	2	-2.0722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	16421139	19851864	1738	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	19853151	19873333	27	-0.8293
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	19873376	32021193	6538	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	32031832	32562530	97	0.5158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	32562740	34317210	357	0.0606
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	34324072	34614572	169	1.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	34618468	54354011	6609	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	54354076	54374147	16	-0.4947
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	16	54374206	88815036	25169	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	526	8183635	4549	-0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	8188272	8188458	2	-2.4816
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	8190183	16603639	5951	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	16603776	16659703	6	0.8564
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	16659768	18296117	927	0.0173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	18299671	18399997	26	-1.3915
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	18405311	23803180	2332	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	23805468	23806446	2	-1.5076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	23813398	36675234	7168	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	36676540	36683712	22	-0.5607
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	17	36683976	78643088	24287	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	1543	24447534	15115	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	24449765	24449993	2	-1.634
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	24450110	36512725	7721	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	36514418	36519387	19	-2.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	36522022	49778199	9135	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	49778840	49779150	3	-1.9328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	49782366	52823765	1815	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	52824492	52825093	2	-1.3769
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	52826944	59029609	4479	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	59030666	59030779	3	-1.0802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	59031276	63997305	3581	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64000358	64034323	33	-1.2276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64047006	64428407	349	-0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64428506	64434510	5	-0.6795
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64435152	64901917	338	0.0218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64901932	64904253	23	0.2811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	64904273	65358832	363	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	65359372	65368807	9	-0.8457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	65371011	74764860	7101	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	74765028	74765851	2	-3.1348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	18	74767437	76116029	705	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	19	41910	20386516	8975	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	19	20388046	20513074	71	-0.7703
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	19	20513302	48389173	11711	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	19	48394873	48448077	22	-0.6409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	19	48458499	63789666	8556	-0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	9305	1508999	1204	-0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	1509580	1541849	40	2.1726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	1541893	26253491	18808	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	26253579	28262642	60	0.2557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	28262658	31092008	896	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	31093951	31099214	4	-1.1364
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	31099247	50506027	12743	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	50509175	50509680	2	1.9264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	20	50511700	62426597	8722	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	21	9758742	9965425	35	-0.0808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	21	9975295	13518880	130	0.2479
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	21	13518903	46921385	24238	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	14432528	14857516	66	0.405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	14870546	21592981	3852	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	21593242	21593257	2	-2.617
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	21593274	22674422	700	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	22680529	22726814	19	-2.142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	22731529	23201783	249	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	23206800	23207292	3	-1.1933
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	23207776	24156486	731	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	24165198	24165457	2	-1.3763
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	24166137	31819298	5641	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	31821288	31824722	5	-1.2494
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	31833574	47654704	11041	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	47655927	47656546	2	-2.3595
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	22	47659295	49581321	1233	-0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	108477	16383145	10151	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	16383400	16383557	6	-0.8207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	16384106	76239519	29984	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	76246673	76440325	22	-0.698
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	76461534	103140415	14239	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	103140431	103215657	66	0.6103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	X	103215677	154835548	30142	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	2710438	6161425	838	-2.6868
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	6167901	6484299	128	-3.9639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	6486233	7459842	419	-3.0892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	7460746	10369564	1202	-3.4839
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	10384614	18080874	3032	-3.2347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	18084284	19547685	704	-3.8106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	19547873	22268551	1052	-3.3251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	22268856	24840062	567	-3.742
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	24840296	24919963	26	-2.2911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	24920187	25725360	94	-4.2408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	25776875	26127308	90	-2.8612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	26127580	26681504	197	-3.8223
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	26687080	26731407	14	-5.1885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	26731471	26833326	43	-3.6256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A01_896584	Y	26847504	57427647	183	-2.8593
