Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	1	3208470	92296781	51302	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	1	92298230	92358667	33	0.5503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	1	92367142	245880329	77657	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	2	474222	242124735	131203	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	3	526235	154087710	83545	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	3	154087998	154090365	2	-1.7818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	3	154095993	199023074	22771	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	4	1043934	126537738	69531	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	4	126541443	126541666	2	-1.804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	4	126542090	189836143	33132	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	5	967233	73478194	38813	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	5	73481180	73481208	2	-1.4836
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	5	73482778	178433145	60678	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	5	178435780	178435826	2	-1.557
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	5	178435944	180293075	926	-0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	6	959281	120818207	66338	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	6	120819643	120820465	2	-2.9048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	6	120821062	131455482	6373	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	6	131460237	131460715	2	-1.3187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	6	131464256	170745844	23697	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	7	671810	158077879	81265	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	607667	67945095	36187	-0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	67952366	67983383	13	-0.9722
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	67986678	83055634	8806	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	83064667	83064905	2	-1.2783
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	83066954	87954850	2401	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	87960921	87960926	2	-1.5684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	8	87961448	145304484	34062	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	9	779932	8522140	4761	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	9	8524927	8585338	48	-1.0366
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	9	8588088	140058573	63161	0
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	10	405240	12876607	8708	-0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	10	12876757	12876845	2	-1.5394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	10	12877448	121793623	63583	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	10	121794318	121797208	3	-1.3938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	10	121800468	135075077	8514	0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	11	446120	126957480	72848	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	11	126958190	126958393	2	-1.4308
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	11	126961338	133647740	4357	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	12	760163	131671419	73892	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	13	18348806	114005560	56596	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	14	19571208	35737300	8655	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	14	35738210	35739072	2	-1.5064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	14	35739155	105059083	40753	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	15	21238778	99701830	44505	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	16	593460	87907437	40837	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	17	933971	78510305	36956	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	18	319586	75210228	42628	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	19	235018	63570038	23930	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	20	403764	61690281	37253	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	21	14269492	39419926	16307	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	21	39419979	39420138	2	-2.2453
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	21	39421064	42427596	2366	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	21	42430728	42432851	2	-1.351
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	21	42432971	46503202	1894	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	22	15803930	47717016	16910	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A03_896510	X	3167107	154558783	63768	9e-04
