Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	51598	1618686	229	0.1275
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	1631963	1662463	14	-0.7024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	1677447	72541504	42733	0.0095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	72541524	72583736	45	-1.2776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	72584492	89247843	10990	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	89250546	89250793	2	-3.06
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	89254112	103904753	9084	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	103910761	104108766	58	0.4669
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	104108781	105424056	696	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	105424463	105425076	2	1.3899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	105428341	105820759	219	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	105820833	105823898	15	0.898
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	105825578	106481751	426	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	106485341	106545666	51	0.5555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	106553731	108567878	1487	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	108570825	108618702	2	-2.9215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	108630480	150822330	10749	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	150822391	150852862	30	1.6125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	150852902	224852365	49941	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	224852405	224856034	2	-1.7307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	224856820	247191011	15886	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	2784	4183562	2986	0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	4191739	4201042	36	-0.5701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	4201387	7556824	2903	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	7560516	7564423	2	1.796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	7564458	34544573	18189	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	34552819	34555239	6	-2.6979
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	34562136	34571412	23	-1.4332
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	34571478	34590561	17	-2.9587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	34590667	52608065	13051	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	52608232	52608385	3	-1.9467
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	52612257	52646332	38	0.4132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	52646441	115252384	34255	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	115252639	115258488	22	-0.9575
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	115258540	130510326	9758	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	130510353	130590958	16	0.6741
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	130591346	146577874	9592	0.0158
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	146577916	146583404	26	0.6847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	146594276	183792398	22870	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	183793698	183797969	10	-0.972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	183802243	212894794	17182	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	212895448	212900070	24	-0.9542
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	212900371	242738129	19074	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	35345	6292359	5586	0.0254
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	6294263	6310472	19	0.7129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	6313436	127151738	74640	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	127156073	127158653	3	-2.583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	127163190	163995843	22740	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	163996153	164050365	28	1.2825
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	164050420	164098609	32	0.4977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	164106536	170212874	3452	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	170216096	170221322	2	-1.753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	170222521	199380515	18477	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	2281	4146564	1699	0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	4150577	4227530	22	0.4847
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	4228074	9080356	3534	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	9087947	9088304	3	-1.5306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	9088443	9819488	547	0.0235
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	9823258	9855370	46	0.3694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	9856610	25897916	11733	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	25901083	25903874	3	-1.1627
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	25904272	34462895	5253	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	34463350	34500578	36	0.6397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	34501120	34822617	207	0.0405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	34823908	34826559	5	-1.0804
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	34833116	35847393	675	-0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	35847862	35852426	2	-1.268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	35853312	37439281	1168	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	37439409	37441321	6	-0.8283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	37441361	48986112	6928	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	48991977	52391549	30	0.4388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	52393393	52943457	317	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	52946508	52949567	2	-1.6936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	52953635	63353729	6692	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	63354182	63362225	3	-1.2044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	63367097	69057550	3464	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	69057755	69168574	63	-0.2887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	69171930	139450881	41840	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	139450950	139451185	2	-2.0701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	139451655	172605106	20672	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	172605921	172614351	13	-1.0629
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	172616946	173224503	397	0.0205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	173225723	173226108	12	0.7972
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	173232554	190108001	11491	0.0171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	190109323	190109787	2	-2.9186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	190109844	191261904	631	0.0528
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	68532	46306865	30822	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	46307687	46309259	6	1.2768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	46313969	57357403	5082	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	57361784	57368712	29	-0.4057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	57369050	110455000	31060	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	110455246	110455318	2	-1.5436
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	110456357	123174109	8958	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	123174343	123174425	2	-1.8802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	123174749	150182398	16699	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	150185693	150198797	8	-0.7457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	150203580	151494364	965	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	151495579	151498544	14	-0.5317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	151500464	168579299	11755	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	168580082	168580178	2	-1.4771
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	168582199	180307129	7562	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	180311316	180350709	19	-1.8881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	180365831	180722926	171	0.0584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	94661	32794174	23058	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	32796593	32798790	10	0.9041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	32798808	49038824	10380	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	49039688	49043159	5	-1.0285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	49054522	54039110	3317	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	54039189	54039814	6	1.4412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	54043307	55055197	649	-0.0284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	55055810	55059230	2	-1.4553
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	55062293	65393663	3706	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	65404265	65405713	2	-2.5251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	65407497	79019608	8946	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	79025784	79095953	113	-0.534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	79098352	103841518	15488	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	103841522	103845099	10	0.6485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	103854114	103854289	5	-0.071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	103854303	103872163	33	0.7279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	103872363	115424791	7307	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	115425715	115432381	3	-2.7412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	115432757	170892930	36949	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	52911	54353999	38580	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	54354003	54354011	5	-1.7077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	54360982	57538469	1908	0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	57540053	57540580	3	-2.2206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	57540651	64231500	1230	0.0485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	64231776	64232364	2	-1.7729
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	64232539	75981759	5344	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	75981775	76017650	9	0.8282
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	76035366	109224909	20320	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	109224911	109241146	25	0.5161
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	109241218	114250711	3004	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	114251645	114251964	2	-1.6978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	114252150	125832792	7036	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	125832887	125833851	10	0.7686
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	125834112	133429192	4707	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	133435717	133448593	30	0.6526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	133448607	134927261	1092	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	134934596	134950064	4	-1.8888
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	134950276	141691401	4342	0.0199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	141693581	141693868	5	0.7826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	141694120	142532332	523	-0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	142538076	142601843	33	-0.8552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	142607892	144778757	1290	0.0462
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	144779198	144782614	5	-1.2567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	144786600	151134743	3946	0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	151137088	151141504	6	-1.2444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	151141656	154018058	1809	0.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	154020828	154030546	5	-1.8917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	154031763	158819765	3246	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	21254	585790	334	0.0341
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	585875	585908	3	1.5984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	591043	2689341	1784	0.0353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	2690940	2691224	6	-1.1234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	2691306	7212778	5727	0.0182
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	7213713	7847316	155	0.439
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	7864332	7903572	24	0.0172
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	7973265	8055342	35	0.4511
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	8055446	12028926	3236	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	12029695	12072406	6	0.9717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	12207108	12260380	8	0.1273
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	12261219	12278771	9	-1.2602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	12284206	12597093	119	0.4226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	12597159	25028104	10402	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	25030360	25039986	22	0.653
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	25040058	28471824	2653	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	28474985	28475259	2	-1.7685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	28476319	39349482	6384	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	39349816	39506122	60	0.8408
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	39507456	112363642	42068	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	112363822	112364421	6	-1.7994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	112364436	146268959	22938	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	9	36587	43523459	31398	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	9	43542722	43740182	28	-0.4547
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	9	44054868	140211215	48514	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	62759	4197003	3508	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4197398	4201793	3	-1.9779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4202543	4603608	449	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4606862	4618784	17	-1.0445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4619077	66978023	40781	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	66978036	66981307	17	0.5616
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	66981366	89019223	14495	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	89028321	89059776	3	1.6678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	89060725	90679515	1182	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	90683517	90683685	2	-1.092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	90687268	92449907	1306	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	92452695	92453271	4	-1.0964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	92461560	134255497	28892	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	134256391	134256982	2	-1.0301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	134257740	135079131	303	0.0296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	135079709	135079858	2	-2.2329
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	135082644	135356694	151	0.0448
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	188510	4923972	2478	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	4924226	4931740	28	0.6194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	4932251	5740499	800	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	5743981	5765715	33	-0.4001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	5765914	7766254	1504	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	7769616	7788834	7	-0.817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	7793585	51193834	29493	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	51209566	51213821	3	-1.4123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	51231886	134449982	52833	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	20703	2106150	1266	0.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	2116123	2128181	41	-0.6251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	2128284	9525137	4900	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	9529176	9604941	21	-1.5157
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	9606832	31171857	15263	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	31172513	31298390	89	0.6048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	31301146	33185911	1303	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33185927	33198641	28	-0.5863
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33199627	33278024	46	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33280096	33286409	4	-1.0244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33286685	33610078	217	0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33614069	33615730	14	0.4175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	33615937	98319868	39114	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	98319904	98327224	28	-0.4681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	98327249	132288262	22770	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	17924949	36969135	13571	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	36970036	36986330	17	0.7917
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	36986374	56649097	12541	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	56656271	56676381	34	-0.5555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	56687715	71374989	9003	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	71375556	71378557	4	-2.5225
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	71378606	114126499	29157	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	18072124	18872541	62	0.0644
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	18914107	19492423	127	-0.4991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	19493212	89097714	44778	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	89098915	89099371	2	-1.6848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	89099632	105618359	10212	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	105618552	105632486	9	1.2164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	105638145	106356482	418	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	18276341	22114522	1389	0.0251
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	22117169	22329984	103	0.561
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	22333360	22971085	434	0.0326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	22972700	22981336	8	-0.6674
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	22984398	51572283	17608	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	51572331	51572571	5	-1.2968
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	51577539	54576939	2031	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	54577995	54579377	22	-0.4896
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	54579392	54588269	3	-1.3593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	54588915	68821067	9652	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	68821198	68821299	3	1.266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	68821323	70789177	1147	0.0206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	70790051	70799047	9	-0.9384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	70804813	80482757	5628	-0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	80692083	80966604	13	0.5715
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	80966626	95609413	10574	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	95618796	95633191	11	-0.6964
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	95634653	100286563	3434	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	777	12556360	9434	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	12556479	12556496	2	-1.4111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	12557748	12621294	125	-0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	12621435	12621544	2	-1.5379
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	12621613	14859076	1569	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	14871200	14956269	8	0.4976
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	14956345	15023758	62	-0.2667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	15032942	16706164	629	0.0861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	16738583	16745127	2	-1.4683
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	16762862	19851864	1701	0.0458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	19853151	19873376	28	-0.6897
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	19874863	22349521	1295	0.0312
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	22465433	22625805	76	0.4658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	22625887	29187251	4224	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	29188025	29188556	3	-1.6647
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	29189266	54354011	8171	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	54354076	54366725	11	-0.5894
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	54366967	76929109	14521	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	76929941	76942266	16	0.9562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	76942502	88815036	10642	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	526	18260587	11442	0.0185
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	18296117	18405946	29	0.7192
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	18409922	41518916	12044	0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	41521621	41750189	127	0.7244
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	41750195	42107462	45	-0.3756
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	42107479	53042488	7014	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	53043332	53043992	2	1.7326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	53046992	59652003	3282	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	59652851	59657652	2	-2.5791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	59657854	78643088	11319	0.0126
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	18	1543	76116029	50826	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	41910	12553001	5076	0.0146
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	12558366	12559102	2	2.112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	12561523	48404090	15696	0.0156
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	48404438	48448077	19	-0.6706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	48458499	56823625	4170	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	56834164	56840009	11	-2.3871
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	56846717	58980313	1539	0.0417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	58983951	58987868	2	1.4826
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	58988017	63632326	2790	0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	63635220	63636187	2	-3.8559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	63637868	63789666	52	0.1154
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	9305	1509580	1207	0.0289
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	1509667	1541893	40	-0.3908
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	1545946	50974325	32886	0.0089
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	50974686	50985008	8	-0.8514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	50987480	62426597	8363	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	21	9758742	46921385	24415	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	14432528	17030979	1212	0.0195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	17035860	17256428	14	0.6776
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	17256713	22660218	3391	0.0654
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	22660269	22661967	2	-2.417
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	22662625	22726814	24	0.519
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	22731529	37620866	10831	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	37625201	37626850	3	-2.6145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	37629060	49581321	8091	0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	X	108477	154835548	84517	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	Y	2710438	57427647	8589	-0.94
