Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	3208470	106481751	59210	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	106485341	106545666	51	0.5555
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	106553731	197212811	38355	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	197215222	197223088	5	-0.9712
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	197223208	222130535	16481	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	222130594	222130736	2	-1.5615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	222132339	224852365	1473	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	224852405	224856034	2	-1.7307
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	1	224856820	245880329	13477	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	2	474222	242124735	131259	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	3	526235	199023074	106365	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	1043934	52943457	28467	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	52946508	52949567	2	-1.6936
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	4	52953635	189836143	74239	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	5	967233	180293075	100482	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	6	959281	170745844	96460	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	671810	114250711	57824	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	114251645	114251964	2	-1.6978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	114252150	151134743	19976	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	151137088	151141504	6	-1.2444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	7	151141656	158077879	3488	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	607667	18640837	9600	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	18641042	18641181	2	1.442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	18641391	28471824	6946	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	28474985	28475259	2	-1.7685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	8	28476319	145304484	64963	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	9	779932	140058573	68006	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	405240	4197003	2210	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4197398	4201793	3	-1.9779
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4202543	4603608	423	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4606862	4618784	17	-1.0445
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	10	4619077	135075077	78200	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	11	446120	133647740	77246	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	12	760163	131671419	73934	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	13	18348806	114005560	56634	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	19571208	77192218	32355	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	77192733	77194875	5	-0.8885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	77198002	89097714	7558	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	89098915	89099371	2	-1.6848
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	14	89099632	105059083	9519	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	21238778	68821067	26942	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	68821198	68821299	3	1.266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	68821323	70789177	1103	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	70790051	70799047	9	-0.9384
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	15	70804813	99701830	16462	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	16	593460	87907437	40853	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	933971	59652003	27389	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	59652851	59657652	2	-2.5791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	17	59657854	78510305	9590	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	18	319586	44468832	25026	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	18	44469599	44472582	2	-1.7991
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	18	44473215	75210228	17622	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	19	235018	63570038	23946	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	403764	50974325	29959	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	50974686	50985008	8	-0.8514
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	20	50987480	61690281	7307	-0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	21	14269492	46503202	20580	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	22	15803930	47717016	16924	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A04_896590	X	3167107	154558783	63692	0.0106
