Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	1	3208470	245880329	129017	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	474222	2691950	761	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	2692664	2700741	3	-1.4872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	2701269	120933801	62356	7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	120934029	120934763	2	-1.6155
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	120934866	232718686	62402	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	232719071	232731253	4	-1.205
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	232731316	241432408	5318	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	241433446	241437368	2	-1.9141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	241441632	242124735	356	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	3	526235	199023074	106332	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	4	1043934	189836143	102681	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	967233	95221784	50698	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	95222612	95227459	8	-1.0516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	95227992	180293075	49743	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	959281	111021174	61054	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	111021986	111028610	5	-1.229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	111031681	170745844	35373	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	671810	2657761	546	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2660869	2766652	57	0.5959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2767167	2899969	82	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2904641	3034906	85	0.5885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	3036641	36874208	19946	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	36875274	36880747	3	-1.1852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	36881608	158077879	60544	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	8	607667	145304484	81485	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	9	779932	140058573	67974	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	10	405240	135075077	80807	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	11	446120	133647740	77208	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	760163	16846736	9110	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	16852060	16871622	14	-0.8504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	16875211	121194469	59948	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	121194490	121207674	3	-1.4541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	121208059	131671419	4827	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	13	18348806	114005560	56615	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	19571208	83364474	36492	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	83369526	83408379	33	0.5524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	83409724	105059083	12899	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	21238778	98563636	43922	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	98564724	98565075	2	-1.7879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	98565731	99701830	575	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	16	593460	87907437	40835	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	17	933971	78510305	36968	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	319586	26194036	13679	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	26195538	26204992	5	-1.4985
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	26205825	37387744	6872	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	37387748	37388840	3	-1.2502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	37389349	75210228	22073	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	19	235018	63570038	23938	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	20	403764	61690281	37265	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	21	14269492	46503202	20574	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	22	15803930	47717016	16910	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	3167107	96348759	36867	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	96352833	96371220	15	-0.9556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	96373652	154558783	26880	6e-04
