Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	1	3218610	163912390	75604	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	1	163912475	163912523	2	-1.6841
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	1	163918425	247813706	53466	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	484222	2712943	761	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	2713657	2721734	3	-1.4872
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	2722262	241783735	130074	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	241784773	241788695	2	-1.9141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	2	241792959	242476062	356	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	3	2212571	197538677	106326	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	4	1053934	188763651	102686	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	914233	95196028	50699	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	95196856	95201703	8	-1.0516
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	5	95202236	180360469	49742	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	1014281	110914481	61056	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	110915293	110921917	5	-1.229
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	6	110924988	170903919	35380	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	705284	2691235	546	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2694343	2800126	57	0.5959
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2800641	2933443	82	0.0211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	2938115	3068380	85	0.5885
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	3070115	36907683	19946	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	36908749	36914222	3	-1.1852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	7	36915083	158385118	60545	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	8	617667	145232496	81492	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	9	789932	140938752	67986	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	10	415240	135225087	80805	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	11	456120	134142530	77198	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	889902	16955469	9108	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	16960793	16980355	14	-0.8504
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	16983944	122628516	59946	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	122628537	122641721	3	-1.4541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	12	122642106	133161346	4826	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	13	19450806	114987458	56611	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	20501368	84294721	36489	-0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	84299773	84338626	33	0.5524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	14	84339971	105988038	12900	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	23687685	100746113	43921	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	100747201	100747552	2	-1.7879
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	15	100748208	101884307	574	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	16	653459	89379936	40770	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	17	987221	80917016	36968	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	329586	27940038	13679	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	27941540	27950994	5	-1.4985
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	27951827	39133746	6872	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	39133750	39134842	3	-1.2502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	18	39135351	77109240	22070	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	19	284018	58878226	23938	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	20	455764	62219837	37268	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	21	15347621	47678774	20573	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	22	17423930	49331012	16909	-0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	3157107	96462103	36878	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	96466177	96484564	15	-0.9556
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A06_896498	X	96486996	154905589	26886	6e-04
