Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	51598	9253066	4694	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	9254539	9254560	2	-1.6818
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	9255290	13248351	1880	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	13248555	13248629	3	-1.0817
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	13249076	16803916	2161	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	16804113	16878321	29	0.3978
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	16878363	16888846	17	-0.3552
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	16889459	17083239	49	0.0903
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	17085301	17134834	57	-0.4728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	17148828	20756009	2545	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	20756090	20756403	3	-1.0895
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	20757528	25455928	2720	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	25465715	25519573	28	-1.5658
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	25534088	34864261	4970	-0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	34875241	34877078	20	-0.632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	34886855	41787387	3766	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	41791043	41796613	3	-0.977
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	41798272	61886594	12709	-5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	61886769	61890775	3	-1.0268
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	61892397	72541006	7298	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	72541086	72583736	47	-1.1949
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	72584492	103960907	20087	6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	103965022	104059102	22	0.4593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	104060967	105293655	635	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	105300544	105302045	2	-1.1214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	105306545	105820728	288	-0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	105820759	105823898	16	-1.9684
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	105825578	110034497	2669	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	110034560	110041701	16	-0.8373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	110044476	111175616	836	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	111177089	111185001	35	0.2584
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	111185302	111581653	270	-0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	111581704	111581882	2	-1.5291
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	111581937	112491849	813	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	112497488	112498764	23	-1.8738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	112498899	147496467	6491	0.0115
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	147509287	147515336	17	0.6298
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	147515351	150822151	1528	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	150822330	150852862	31	1.5153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	150852902	150853218	4	0.6768
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	150857118	151028547	172	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	151028563	151035324	36	0.6248
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	151040529	166838455	10744	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	166839798	166841322	4	-0.9638
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	166846716	177590361	7213	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	177597151	177599938	4	-0.8549
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	177605829	177964609	229	-0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	177968315	177968692	2	-1.1127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	177969184	190682823	8392	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	190685431	190687251	5	-1.2738
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	190687520	191422415	544	-0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	191422902	191422955	3	-1.0349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	191422971	235333993	29972	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	235340642	235345777	14	-1.5828
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	1	235346828	247191011	8456	0.0153
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	2784	20143	10	-0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	23901	24346	3	-0.9434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	26862	285136	167	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	285255	286852	4	-1.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	290879	24460458	17761	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	24460486	24464632	14	-0.7358
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	24465231	34544573	6149	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	34552819	34590561	46	-2.0811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	34590667	38807999	3203	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	38809370	38825785	8	0.646
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	38826330	52607972	9834	0.0122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	52607984	52635046	39	0.5206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	52641453	87366798	22121	0.007
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	87367890	87367901	2	-1.4565
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	87373867	123193484	17107	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	123196369	123198711	9	-0.7764
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	123200123	180121616	34927	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	180126456	180130382	30	-0.5728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	2	180133888	242738129	38588	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	35345	16214067	12944	0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	16215560	16216183	6	-3.2349
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	16216329	44574505	18872	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	44577324	44598780	11	-1.045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	44607499	52998251	3947	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	53003415	53013942	34	-0.5499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	53013984	75651239	16987	0.0079
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	75655239	75669495	5	-1.8717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	75677871	100420474	11013	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	100427148	100431998	36	-2.093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	100432004	130794900	18533	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	130795679	130796179	2	-2.1858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	130799284	133475427	1710	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	133475463	133478374	3	-2.2284
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	133483167	164015644	18856	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	164017424	164022703	4	0.9024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	164023167	164023184	2	2.6304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	164028410	166523557	1365	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	166524242	166564633	65	-0.81
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	3	166568123	199380515	20533	0.0107
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	2281	2454441	984	0.0416
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	2456074	2456284	2	1.1788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	2457164	9015216	4232	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	9015221	9016339	2	-1.4247
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	9017305	9819488	583	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	9823258	9843364	31	-2.0711
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	9843706	34455255	16990	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	34455357	34500578	43	0.5418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	34501120	55192643	10840	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	55196483	55200117	3	-1.8541
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	55200690	64374002	5742	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	64374654	64409451	40	0.3049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	64409471	69057943	2873	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	69072887	69168574	61	0.4502
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	69171930	144994212	45462	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	144998366	145221539	127	0.4952
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	145224130	162093450	10203	0.0016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	162099468	162104369	22	-0.6243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	162104408	172605921	6674	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	172611459	172614033	9	-1.2926
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	172614285	190812438	12364	0.0219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	190815690	190927939	38	0.2861
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	190928337	190958813	22	0.7068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	4	190959285	191261904	113	0.0346
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	68532	679278	276	0.0679
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	690277	690290	2	-1.3444
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	695732	16177245	12186	0.0191
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	16178128	16178214	3	-1.1597
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	16180544	17568801	952	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	17644656	17672912	20	0.3506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	17673261	19882436	1405	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	19888491	19891916	3	-0.9727
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	19897837	21485033	930	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	21486957	21488195	5	0.805
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	21488253	32138488	6587	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	32142841	32194212	40	1.1446
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	32206044	39810952	5069	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	39812016	39812292	2	-1.4491
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	39813856	57361784	8416	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	57361920	57368673	27	-0.4793
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	57368712	58339315	746	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	58339383	58340327	4	-1.3488
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	58340462	103879120	26119	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	103888272	103888503	4	1.4713
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	103888948	150182398	29831	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	150185693	150198797	8	-0.8175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	150203580	177131055	18472	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	177160157	177165211	3	2.4609
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	177187571	180307129	1813	0.0209
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	180311316	180350709	19	-2.2678
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	5	180365831	180722926	171	0.0485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	94661	199283	101	0.0378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	202353	231393	16	0.7877
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	235598	323703	82	0.3603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	324015	9150481	7204	0.0127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	9157368	9189309	3	-1.4328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	9282778	29845656	14248	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	29845825	29846023	2	-1.811
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	29846979	29945051	83	0.0932
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	29945166	29957246	16	0.9845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	29958175	31388802	671	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	31394255	31403385	7	1.1852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	31403932	32560779	511	0.0176
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32560907	32669273	31	0.8301
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32678024	32695435	16	0.1016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32700999	32710247	8	0.6745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32712350	32794174	48	0.0428
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32796593	32798923	12	0.6195
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	32800205	54039026	13689	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	54039043	54043374	10	-0.5124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	54043657	58530601	2414	0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	58534011	58535028	5	-0.9458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	58540533	67094767	3074	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	67097634	67099618	6	-2.4309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	67099913	74648953	5022	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	74649185	74658138	9	-2.5085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	74660283	77493251	1768	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	77496587	77509476	21	-0.6331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	77517792	79019608	979	0.0204
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	79025784	79089036	106	-0.5382
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	79089311	80178682	643	0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	80180280	80184265	9	0.4554
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	80186652	103841522	14842	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	103844669	103868754	46	0.6213
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	6	103872163	170892930	44227	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	52911	24220690	17375	0.0159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	24223842	24224231	5	-1.1944
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	24225298	43586819	13737	0.0038
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	43594693	43597893	4	-0.9458
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	43602711	53284323	6695	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	53285881	53286279	2	-2.4574
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	53289177	54353999	755	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	54354003	54354011	5	-2.0904
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	54360982	61687046	2156	0.0163
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	61692194	62357651	251	0.54
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	62358421	62546959	18	-0.049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	62553697	62720775	14	0.4348
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	62721988	89947292	15048	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	89948831	89985483	32	0.2399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	89985555	91195153	865	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	91195169	91196476	9	-0.5125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	91196707	95323291	2549	-0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	95325994	95326433	2	-1.1538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	95327448	100867643	2783	0.0227
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	100868518	100868706	2	-1.1122
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	100872978	102136421	511	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	102139083	102145543	13	-0.4938
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	102145577	125832210	14615	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	125832718	125833851	12	0.7324
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	125834112	134856108	5785	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	134864208	134868333	7	-0.852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	134869187	141406463	4145	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	141407299	141438576	46	0.3429
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	141441750	142928980	948	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	142929090	143163931	91	0.2792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	143174784	154595493	7339	0.0164
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	154596312	154598060	15	-0.4093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	7	154599463	158819765	2661	0.0267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	21254	6813262	7719	0.0391
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	6813673	6814609	12	-0.6661
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	6820778	7174056	100	0.0582
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	7181231	7836261	173	-0.4303
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	7836800	12260380	3310	0.0124
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	12261219	12349027	56	-0.612
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	12355055	34848181	17107	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	34849473	34849587	3	-1.1133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	34849979	39349816	2417	0.015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	39354760	39506122	58	-2.2039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	39507456	83055634	24548	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	83064667	83064905	2	-2.0892
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	83066954	112363822	17497	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	112363846	112364421	5	-1.8639
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	112364436	115703883	1829	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	115704083	115704877	8	0.6003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	115707526	119336677	2412	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	119337722	119337730	2	-1.297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	119341674	144770300	18162	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	144776300	144776418	3	-1.0466
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	8	144777888	146268959	510	0.0505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	36587	5069156	5247	0.0215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	5071416	5071766	8	0.7934
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	5071852	6685502	1129	0.0203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	6685986	6698357	8	-0.7751
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	6702314	15286450	7575	0.0206
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	15286795	15370657	83	-1.0563
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	15372671	23351805	6399	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	23353115	23370445	11	0.7331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	23370834	41682303	10874	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	41682317	42125708	19	0.4328
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	42126026	43494458	30	0.039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	43523459	43712046	25	-0.3232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	43716914	45613030	140	0.1338
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	45639014	45639104	2	1.4434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	45805240	46003398	16	0.0766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	46026076	46100378	4	1.4326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	46184325	67673801	81	0.1078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	67675871	67678367	8	1.4858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	67699736	78142249	6036	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	78147391	78158756	16	-1.0434
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	9	78158879	140211215	42186	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	62759	18123568	14891	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	18146449	18239819	10	0.6496
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	18263653	27267771	6353	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	27268356	27269999	6	-0.8735
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	27270681	31286516	3034	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	31291340	31291732	9	-0.7399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	31291744	36313041	3306	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	36313395	36316078	2	-1.2286
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	36317990	44528231	3347	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	44530696	44677804	115	0.6454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	44686913	46094186	500	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	46111165	46111486	2	-1.0314
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	46337321	46352201	4	-2.8196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	46363383	46812338	165	-0.3331
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	46821347	54807367	4450	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	54807451	54812107	3	-1.3214
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	54812169	66978023	8541	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	66978036	66992801	25	-0.3782
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	66992932	79200219	7832	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	79200233	79201412	2	-1.2413
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	79201542	84932204	3881	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	84937126	84937863	5	-0.857
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	84940521	89019223	2761	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	89028321	89036478	2	2.211
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	89059776	89102873	13	0.5133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	89107280	114082757	16311	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	114083575	114084678	2	-1.2119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	114084921	120021064	4146	-0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	120021942	120022406	2	-1.2201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	120024233	121364118	887	-0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	121367453	121367748	2	-1.6082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	10	121367994	135356694	10460	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	188510	5740499	3303	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	5743981	5768936	36	0.5132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	5772762	6074552	243	-0.0208
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	6077223	6078670	2	-1.7827
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	6079079	18897446	9177	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	18905648	18932028	76	0.2808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	18934236	31349870	9073	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	31350844	31353656	2	-2.2602
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	31354783	55119916	12746	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	55130608	55198894	48	-0.4403
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	55200787	55201564	3	0.4808
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	55201870	55209585	8	-0.5118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	55210152	99344899	27192	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	99348556	99348572	2	-1.5323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	99348812	106119962	4864	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	106124949	106125412	4	-0.965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	106134781	106735929	400	0.0243
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	106743866	106744338	7	-0.718
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	11	106757572	134449982	19950	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	20703	8248774	5551	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	8253317	8269518	11	0.895
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	8285095	11112094	1708	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	11113635	11132799	10	-1.4039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	11143141	30130534	13301	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	30130581	30135200	25	-0.5495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	30135217	44190705	7922	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	44192107	44195804	3	-1.924
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	44199559	51212236	3968	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	51214182	51214789	3	-1.2415
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	51215819	57007498	3245	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	57016418	57016429	2	1.1431
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	57017115	82687318	16437	-3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	82687421	82689372	3	-1.5344
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	82689410	127796466	29792	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	127796769	127798250	5	-1.3996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	127798498	130683088	2490	0.0196
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	130683492	130708284	19	0.524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	12	130708322	132288262	571	0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	17924949	18266654	75	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	18266692	18267592	8	-0.7216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	18293638	19386155	656	0.0266
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	19386212	19386702	2	-0.9899
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	19390672	19790398	210	-0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	19790604	19790689	2	-1.4171
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	19791431	21382207	1060	0.0149
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	21382411	21382460	2	1.6824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	21382841	23920166	2020	0.0143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	23921936	23938042	24	0.3057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	23938057	36968044	9501	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	36968370	36986330	19	-0.4042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	36986374	56569887	12499	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	56571812	56571831	2	-1.637
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	56574365	57482791	487	0.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	57488282	57495031	6	-1.0456
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	13	57500053	114126499	37724	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	18072124	19227683	81	-0.0256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	19270023	19490079	107	0.5133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	19492423	44243850	15781	0.0099
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	44251898	44293463	32	-0.8928
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	44296609	105531947	39128	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105550720	105550986	2	-2.0486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105553173	105786375	103	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105786534	105799207	10	0.6245
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105807285	105822329	9	-0.0603
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105824904	105824912	3	-1.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	14	105825048	106356482	330	0.0849
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	18276341	18525992	55	0.0598
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	18527876	20088324	365	0.4481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	20088838	21934123	875	0.0326
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	21935658	21985625	31	0.6077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	21993312	22225980	101	-0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	22226226	22276386	39	-0.6645
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	22278324	32481928	6343	0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	32482614	32514481	12	-0.2929
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	32514914	32617545	62	-0.6997
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	32617680	51982281	11963	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	51987642	51989791	3	-1.3996
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	51991520	63601155	7945	0.0074
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	63603995	63605440	3	-2.9916
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	63609587	74656984	6547	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	74665417	74682830	23	0.9207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	15	74689234	100286563	17682	0.0133
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	777	19851864	13529	0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	19853151	19877755	30	-0.7399
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	19877991	32031832	6533	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	32054387	33456316	205	0.3636
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	33457501	33539331	35	0.6778
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	33550900	54352715	6986	0.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	54353890	54379945	22	-0.4062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	54387058	68694369	8767	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	68697043	68755268	14	0.4881
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	68755831	71128703	1254	0.0178
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	71131189	71144687	5	-1.0506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	71149810	72954559	1254	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	72955488	73014102	8	0.5459
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	73022897	76929109	3208	0.0082
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	76929941	76942266	16	-2.105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	76942502	84710928	8091	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	84711365	84711479	2	-1.5922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	16	84711515	88815036	2544	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	526	12883051	7973	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	12883191	12883610	2	-1.4218
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	12884448	18373803	3483	0.0169
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	18381685	18394162	6	-1.4527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	18399997	23803180	2334	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	23805468	23806446	2	-1.4503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	23813398	31461241	4591	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	31464091	31559764	38	0.5091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	31567456	36675234	2544	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	36676540	36683976	23	1.0559
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	36684057	40930704	2163	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	40941880	41010873	6	-0.6418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	17	41012163	78643088	22125	0.008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	1543	1892886	1314	0.0405
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	1895358	1970787	95	-1.0398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	1976214	14651643	8814	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	14653971	14662479	2	1.2306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	14681685	24447426	4888	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	24447534	24450128	5	-1.3072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	24450630	29231935	3070	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	29234265	29245715	9	-0.7802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	29248324	36512725	4642	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	36514418	36524070	23	-0.5234
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	36524196	38305676	1210	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	38310567	38311765	25	-0.7423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	38312393	49520859	7735	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	49521095	49521390	6	0.725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	49522182	54247495	3061	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	54247758	54250387	2	-1.7725
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	54250472	61872559	5464	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	61878472	61883787	15	-0.5075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	18	61883808	76116029	10430	0.0194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	41910	12553001	5074	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	12558366	12559102	2	2.1317
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	12561523	20386516	3908	0.0147
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	20388046	20513074	71	-0.6987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	20513302	40541162	7770	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	40541333	40553619	21	-0.7693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	40553688	43029422	1216	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	43031655	43036057	4	-0.8648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	43037574	48394873	2703	0.0139
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	48395344	48448077	21	-0.8228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	48458499	49597745	751	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	49598364	49598387	2	-1.6387
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	49598459	58208894	4370	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	58210326	58244041	23	0.5231
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	19	58246052	63789666	3415	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	20	9305	1508999	1206	0.0132
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	20	1509580	1538257	37	1.2766
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	20	1538455	28081553	18827	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	20	28083035	28143576	13	-0.6111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	20	28147343	62426597	22408	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	21	9758742	13368583	130	0.1987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	21	13374733	13471836	18	-0.4508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	21	13482581	43792481	22488	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	21	43795301	43797240	2	-2.8858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	21	43798095	46921385	1766	0.02
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	22	14432528	41222277	17419	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	22	41222383	41285375	29	0.484
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	22	41285732	49581321	6103	0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	108477	6458524	3001	-0.0142
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	6459766	6471450	25	0.6252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	6477914	6790890	221	1.0812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	6791947	7113206	232	-0.0362
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	7113283	7116206	3	-4.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	7118850	8031928	686	0.016
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	8034046	8095657	55	1.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	8101089	113232500	55496	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	113237412	113240595	5	-4.9733
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	113240946	115051983	932	-0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	115052431	115064666	6	-1.5486
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	115070447	145637587	18362	0.0105
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	145638183	145638583	4	-2.9509
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	X	145639023	154835548	5336	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	Y	2710438	14099670	3538	-1.4963
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	Y	14099736	14100931	2	-3.4151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A07_896516	Y	14103917	57427647	5048	-1.5087
