Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	51598	8266469	4164	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	8269948	8311158	19	0.5587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	8315805	12762163	2347	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	12764515	12847183	39	-0.4998
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	12849694	16026084	1853	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	16026123	16026512	5	-1.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	16026788	16878565	350	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	16884037	17134834	121	-0.4574
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	17148828	59760406	25299	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	59763379	59830867	38	-0.8269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	59831294	72541504	8747	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72541524	72583736	45	-1.1091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72584492	72749313	96	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72753018	72754214	5	-0.9993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72756066	103904311	19970	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	103904580	103959832	27	0.476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	103960870	110025907	3621	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	110025950	110038455	27	-0.3707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	110038470	112491849	1963	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	112497488	112507585	28	0.4465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	112507605	144413472	5605	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	144414638	144425789	2	-2.0946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	144426690	147220620	772	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	147291426	147703466	165	-0.4925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	147788464	150822151	1494	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	150822330	150852862	31	1.6728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	150852902	246804070	65652	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	246815817	246856911	28	-0.701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	246861087	247191011	149	0.0588
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	2784	12599286	9658	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	12602820	12613687	11	-1.1203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	12614494	13452427	526	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	13454385	13467123	5	1.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	13467179	41091739	18792	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	41091947	41096959	21	-0.5543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	41099053	86981712	30250	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	86982714	86990896	2	-1.8485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	87015364	89365022	869	-0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	89374870	89636367	20	-0.3567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	89639248	89904391	146	-0.7305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	89904408	91176561	59	-0.3397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	91176960	97391786	981	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	97429511	97543744	18	-0.6625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	97545636	114078485	9429	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	114078884	114078886	2	-1.7297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	114097291	123193484	5708	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	123196369	123198711	9	-2.0966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	123200123	146578555	14392	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	146580874	146583404	24	0.6946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	146594276	159666866	7796	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	159668589	159669219	2	-2.1681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	159671533	180121616	12718	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	180126456	180130133	27	-0.5423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	180130151	183792398	2322	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	183793698	183797969	10	-0.8226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	183802243	184502096	430	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184502645	184510548	15	-0.6577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184510560	185024921	395	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	185025125	185028304	4	1.2592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	185033764	208063200	13278	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	208063423	208067581	16	-0.7145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	208067721	242738129	22137	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	35345	52998251	35797	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	53003415	53014156	37	-0.5442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	53014257	61799350	6653	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	61800005	61803641	2	-1.5762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	61803916	68828854	5383	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	68828949	68831476	16	0.4136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	68831635	75651239	4937	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	75655239	75669495	6	0.994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	75677871	89469736	7718	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	89469791	89503178	56	-0.5667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	89508504	100419653	3240	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	100420474	100434073	41	0.4499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	100434524	131269711	18765	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	131269889	131288926	40	0.6506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	131289614	150445666	11919	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	150446085	150450811	25	-0.7309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	150453770	163995351	8343	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	163995433	164007552	11	0.8263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	164011324	164019517	7	-0.3748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	164022703	164108689	51	0.7252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	164109266	194360596	19201	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	194360656	194365597	19	-1.3451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	194369129	196895127	1492	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	196897393	196959853	41	0.4175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	196960434	199380515	1174	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	2281	4150577	1702	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	4154245	4203661	10	-0.8973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	4210964	9060445	3534	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9061021	9088443	11	-0.7611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9095185	9819488	546	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9823258	9854053	44	0.4228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9854996	32044449	15639	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	32044463	32045411	4	-1.1663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	32049212	34455449	1347	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	34462895	34495505	34	-0.3215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	34495606	36069826	1049	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	36070688	36073692	2	-1.7136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	36074110	69054598	18447	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	69057536	69211554	70	0.4791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	69219747	115393149	27739	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115394772	115401624	23	-1.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115403678	115403715	3	1.1141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115403759	117134057	1056	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	117134304	117146564	3	-1.4685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	117146966	138158747	12086	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	138158820	138162492	12	-0.5424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	138162501	162099591	14888	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	162099647	162104050	17	-0.6095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	162104358	172605921	6678	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172611459	172614285	10	0.9809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172614299	173224503	399	-0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	173225723	173226108	12	-1.3987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	173232554	190432112	11737	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	190432616	190436258	3	-2.8451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	190436765	191261904	386	-0.0296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	68532	120445278	74196	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	120452137	120495551	24	-0.9806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	120496527	140198906	11849	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	140204020	140223940	13	-0.7323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	140232347	180722926	27072	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	94661	202353	102	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	203265	326149	96	-0.8321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	327559	29945167	21544	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	29945293	29958175	15	-0.9457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	29958253	31388802	672	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	31394255	31403932	8	1.0824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	31403966	32173770	298	0.0508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	32174142	32182569	15	0.5796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	32200185	65393663	18377	0.0075
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	65404265	65405713	2	-1.8418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	65407497	77071668	7645	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77073620	77073646	3	1.5066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77073713	77084501	31	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77089673	77089909	2	1.5347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77089929	77493251	263	-0.0304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77496587	77509101	15	-4.0283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77509111	77509476	6	-1.4887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77517792	79019593	978	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	79019608	79083964	103	0.3365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	79084016	81341478	1444	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	81341677	81346253	27	-0.8285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	81351060	103844669	14026	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	103844732	103868754	45	0.6911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	103872163	170892930	44249	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	52911	7099793	3577	0.0136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	7100186	7100558	2	-2.2424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	7104066	16770515	7960	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16772826	16774997	2	-1.6233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16778078	53984260	26749	0.0057
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	53984450	53986737	3	-1.4097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	53987477	54347867	283	0.0355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54353999	54354011	6	-2.1478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54360982	89040019	16916	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	89044207	89047137	2	-1.8256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	89047549	125832792	21965	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	125832887	125833851	10	-1.1224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	125834112	143577811	11313	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	143583246	143697880	31	0.5173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	143705862	158819765	9697	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	21254	7158507	7832	0.0236
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	7174042	7174056	2	2.1583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	7181231	12242625	3484	0.0287
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	12260380	12291857	40	-1.323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	12305298	25028104	10493	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	25030360	25040140	25	0.5737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	25040167	39349816	9035	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	39354760	39506122	59	0.7737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	39507456	65011190	13665	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	65011451	65011672	6	1.5194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	65012064	146268959	51339	0.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	36587	9786608	9335	0.0187
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	9788243	9812053	57	-0.717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	9813724	23353115	11069	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	23353933	23363484	7	0.9333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	23368488	26900547	2557	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26900951	26902473	2	-2.2534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26903262	32104291	3915	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	32104306	32104458	4	-1.7053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	32106505	41622708	4400	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	41682297	41723631	6	-0.7425
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	41832529	42014172	12	0.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	42055266	44569219	111	-0.1421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44667855	44721286	20	0.7858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44721856	44745084	6	0.0918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44746411	44795733	10	0.9412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44806024	68221362	247	-0.0394
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	68227664	68382541	10	-0.6852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	68388048	140211215	48171	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	62759	13090011	10941	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	13090029	13090176	4	-1.0378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	13090434	27263909	10306	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	27265910	27268479	13	-0.7681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	27269999	45390058	10257	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	45392878	45408067	13	-0.5802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	45408969	45632493	46	0.0693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	45905767	45931287	4	1.1812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	45947683	46475660	86	-0.1028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46475717	46479232	12	0.7342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46479394	47417400	277	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47432905	47433407	2	-1.7886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47468066	66975117	12789	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	66976085	66984436	30	0.5025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	66984452	77922857	6806	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	77927067	77927616	2	1.887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	77931273	89028321	7679	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	89036478	89059776	2	2.0812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	89060725	135356694	31844	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	188510	1601016	485	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	1601481	1602542	2	-1.8404
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	1604155	4212705	1306	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4212876	4292454	24	-1.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4292643	4926819	664	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4926853	4930605	23	-1.6148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4931740	4932965	8	-0.6681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4933069	5743981	794	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	5744656	5765715	32	-0.5526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	5765914	24398682	13854	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	24398750	24406833	7	-0.9464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	24411752	49715563	16713	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	49716131	49716632	5	-0.9442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	49717264	55118007	752	0.03
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	55119916	55232136	74	0.3112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	55232215	118157019	40302	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118160324	118160660	2	-2.5914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118165345	133322682	11287	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	133322866	133323307	2	1.398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	133324652	134449982	840	0.0648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	20703	7886054	5374	0.0166
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	7895692	8015167	60	0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	8022225	11112094	1842	-0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11113635	11132799	10	-1.2672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11143141	11402845	134	0.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11403759	11434673	30	-0.6845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11443459	33185911	15433	0.0027
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	33185927	33198641	28	-0.6432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	33199627	44186092	5626	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	44190705	44195804	4	1.8601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	44199559	130686200	55973	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	130686539	130699288	15	0.5537
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	130708284	132288262	572	0.0353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	17924949	31430622	9648	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	31430727	31436423	17	-0.7049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	31438047	50443055	13049	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	50444912	50447199	2	1.9469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	50447558	114126499	41609	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	18072124	18452344	25	0.0481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	18472242	18492533	4	1.2136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	18502799	40680246	13808	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	40680440	40707179	10	-0.8524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	40707565	73076460	20496	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	73076604	73099653	8	1.1009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	73099668	87473129	9530	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	87473147	87473994	10	0.7219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	87474235	105531947	11255	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105550720	105550986	2	-1.6967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105553173	105606340	24	-0.1922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105609107	105632486	13	-2.1042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105638145	105854089	103	-0.0694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105867070	105892781	11	1.3046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105896961	105939599	27	-0.0238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	105943107	106014879	63	-0.5044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106019613	106356482	214	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	18276341	18672040	64	0.0755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	18672492	18906699	82	0.5758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	18977400	19003808	4	-0.4608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	19003961	20224763	272	0.6143
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	20232440	30276545	5849	0.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	30291556	30299512	9	-0.9789
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	30318608	54576939	15296	0.006
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	54577995	54588269	25	-0.475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	54588915	74678296	12757	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	74678566	74679081	7	1.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	74679096	74682830	14	0.5984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	74689234	91963246	11501	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	91964353	91964377	2	1.5127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	91964704	95918046	2957	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	95918060	95922152	2	-1.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	95930041	100286563	3230	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	777	32496123	20168	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	32496402	32496410	5	-3.4862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	32516775	33004923	75	-0.1454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	33009105	33539331	91	-0.3743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	33550900	34317210	213	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	34324072	34625748	176	0.5091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	34625788	52015518	4574	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	52026888	52026964	2	-1.9264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	52027308	54356280	2032	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	54361849	54379470	13	0.6135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	54379898	88815036	25171	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	526	18318003	11456	0.0145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	18321119	18399997	16	-0.73
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	18405311	36675234	9509	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	36676540	36684057	24	1.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	36686250	45554584	4476	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	45555610	45559057	3	-1.4631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	45563273	68011111	14036	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	68012736	68013753	2	-1.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	68014461	78643088	5789	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	1543	3044587	2145	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3046688	3047729	4	-1.4792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3048407	36512725	20694	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	36514418	36519387	19	-0.562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	36522022	61353956	17135	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	61353975	61355697	16	0.7773
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	61358176	64894325	2592	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	64897086	64909149	45	-0.6544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	64909226	76116029	8175	0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	41910	5457659	1598	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	5461239	5461653	3	-2.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	5461700	63789666	27753	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	9305	1538455	1244	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	1538534	1541893	3	-1.3368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	1545946	16610218	11757	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	16610745	16615772	13	-0.8666
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	16617877	23444724	5311	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23444874	23446207	2	1.6199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23446531	23499816	51	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23500298	23500673	2	1.3829
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23501340	25672407	1483	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25679638	25685116	4	-1.2761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25686625	62426597	22632	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	9758742	9998033	59	-0.4652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	9998553	27202384	9963	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	27204531	27204723	3	-1.8269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	27205475	43792481	12619	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	43795301	43797240	2	-2.1495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	43798095	46921385	1767	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	14432528	22601745	4590	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	22613016	22660218	26	-0.4319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	22660269	22661967	2	-2.966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	22662625	22674422	5	-0.4181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	22680529	22726814	19	0.5159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	22731529	40647057	12476	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	40647871	40649602	2	-2.3022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	40653859	49581321	6445	0.0152
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	108477	116134496	61507	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116136465	116136537	2	-3.6008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116136742	154835548	23040	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	Y	2710438	57427647	8589	-0.9257
