Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	61735	8343882	4164	0.0114
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	8347361	8388571	19	0.5587
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	8393218	12839576	2347	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	12841928	12859413	8	-1.0493
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	12862241	12924596	30	-0.3354
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	12927107	16153497	1854	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	16153536	16153925	5	-1.5708
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	16154201	17005978	350	-0.0276
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	17011450	17262247	121	-0.4574
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	17276241	59987818	25295	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	59990791	60058279	38	-0.8269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	60058706	72768916	8828	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72768936	72811148	45	-1.1091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72811904	72976725	96	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72980430	72981626	5	-0.9993
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	72983478	104102788	19961	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	104103057	104158309	27	0.476
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	104159347	110224384	3621	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	110224427	110236932	27	-0.3707
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	110236947	112690326	1963	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	112695965	112706062	28	0.4465
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	112706082	145702115	5603	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	145703281	145714432	2	-2.0946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	145715333	148953996	770	0.0534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	149024802	149436842	165	-0.4925
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	149521840	152555527	1495	0.0177
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	152555706	152586238	31	1.6728
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	152586278	248737447	65648	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	248749194	248790288	28	-0.701
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	248794464	249224388	150	0.0593
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	12784	12681835	9656	0.013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	12685369	12696236	11	-1.1203
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	12697043	13534976	526	-7e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	13536934	13549672	5	1.0409
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	13549728	41238235	18792	0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	41238443	41243455	21	-0.5543
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	41245549	87128201	30244	0.0119
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	87129203	87137385	2	-1.8485
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	87161853	89583907	866	-0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	89593755	89999062	20	-0.3567
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	90001943	90267086	146	-0.7305
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	90267103	91812834	59	-0.3397
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	91813233	98025647	981	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	98063372	98177312	18	-0.6625
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	98179204	114362015	9430	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	114362414	114362416	2	-1.7297
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	114380821	123477014	5707	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	123479899	123482241	9	-2.0965
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	123483653	146862085	14388	0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	146864404	146866934	24	0.6946
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	146877806	159958620	7796	0.0026
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	159960343	159960973	2	-2.1681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	159963287	180413371	12718	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	180418211	180421888	27	-0.5423
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	180421906	184084153	2323	0.0078
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184085453	184089724	10	-0.8226
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184093998	184793851	429	0.0015
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184794400	184802303	15	-0.6577
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	184802315	185316676	395	0.0212
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	185316880	185320059	4	1.2592
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	185325519	208354955	13281	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	208355178	208359336	16	-0.7145
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	208359476	243089456	22137	0.0069
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	60345	53023211	35797	0.0102
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	53028375	53039116	37	-0.5442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	53039217	61824310	6652	0.0116
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	61824965	61828601	2	-1.5762
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	61828876	68746164	5383	5e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	68746259	68748786	16	0.4136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	68748945	75568549	4936	0.0023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	75572549	75586805	6	0.994
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	75595181	79072067	2006	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	79075059	79075527	2	-1.4591
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	79075911	89387046	5706	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	89387101	89420488	56	-0.5667
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	89425814	98936963	3239	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	98937784	98951383	41	0.4499
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	98951834	129787021	18765	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	129787199	129806236	40	0.6506
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	129806924	148962976	11919	0.0065
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	148963395	148968121	25	-0.7309
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	148971080	162512657	8342	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	162512739	162524858	11	0.8263
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	162528630	162536823	7	-0.3748
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	162540009	162625995	51	0.7252
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	162626572	192877902	19202	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	192877962	192882903	19	-1.3451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	192886435	195409946	1492	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	195412212	195474182	41	0.4175
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	195474763	197896118	1174	0.0092
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	12281	4099676	1702	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	4103344	4152760	10	-0.8973
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	4160063	9451347	3534	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9451923	9479345	11	-0.7611
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	9486087	10210390	546	0.0113
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	10214160	10244955	44	0.4228
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	10245898	32400551	15639	0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	32400565	32401513	4	-1.1663
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	32405314	34779054	1347	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	34786500	34819110	34	-0.3215
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	34819211	36393431	1049	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	36394293	36397297	2	-1.7136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	36397715	69372003	18450	0.0096
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	69374941	69528959	70	0.4791
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	69536788	115173700	27739	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115175323	115182175	23	-1.376
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115184229	115184266	3	1.1141
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	115184310	116914608	1056	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	116914855	116927115	3	-1.4685
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	116927517	137939297	12087	0.0117
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	137939370	137943042	12	-0.5424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	137943051	161880141	14890	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	161880197	161884600	17	-0.6095
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	161884908	172369346	6679	0.0093
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172374884	172377710	10	0.9809
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172377724	172987928	399	-0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172989148	172989533	12	-1.3987
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	172995979	190195118	11736	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	190195622	190199264	3	-2.8451
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	190199771	191027923	386	-0.0296
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	15532	120417379	74196	0.0048
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	120424238	120467652	24	-0.9806
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	120468628	140218722	11848	0.0087
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	140223836	140243756	13	-0.7323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	140252163	180790320	27074	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	149661	257353	102	0.0183
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	258265	381149	96	-0.8321
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	382559	29837188	21543	0.0066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	29837314	29850196	15	-0.9457
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	29850274	31280823	672	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	31286276	31295953	8	1.0824
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	31295987	32065792	298	0.0508
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	32066164	32074591	15	0.5796
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	32092207	65336942	18379	0.0076
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	65347544	65348992	2	-1.8418
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	65350776	77014948	7644	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77016900	77016926	3	1.5066
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77016993	77027781	31	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77032953	77033189	2	1.5347
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77033209	77436532	263	-0.0304
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77439868	77452382	15	-4.0283
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77452392	77452757	6	-1.4887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	77461073	78962874	978	0.0129
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	78962889	79027245	103	0.3365
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	79027297	81284759	1444	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	81284958	81289534	27	-0.8285
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	81294341	103737976	14025	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	103738039	103762061	45	0.6911
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	103765470	171051005	44256	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	43355	7133268	3575	0.0137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	7133661	7134033	2	-2.2424
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	7137541	16803990	7962	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16806301	16808472	2	-1.6233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16811553	54016766	26745	0.0058
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54016956	54019243	3	-1.4097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54019983	54380373	283	0.0355
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54386505	54386517	6	-2.1478
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54393488	89202083	16920	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	89206271	89209201	2	-1.8256
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	89209613	126045556	21968	0.0044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	126045651	126046615	10	-1.1224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	126046876	143946878	11312	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	143952313	144066947	31	0.5173
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	144074929	159127004	9698	0.0104
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	31254	2685346	2078	0.0269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	2685522	2688009	2	-1.5267
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	2688065	7171097	5753	0.023
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	7186632	7186646	2	2.1583
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	7193821	12198254	3482	0.0288
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	12216009	12247486	40	-1.323
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	12260927	24972187	10494	0.0083
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	24974443	24984223	25	0.5737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	24984250	39230659	9036	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	39235603	39386965	59	0.7737
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	39388299	64848636	13666	0.0019
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	64848897	64849118	6	1.5194
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	64849510	146298155	51344	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	46587	9796608	9337	0.0186
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	9798243	9822053	57	-0.717
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	9823724	23363115	11070	0.0101
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	23363933	23373484	7	0.9333
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	23378488	26910547	2557	0.0167
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26910951	26912473	2	-2.2534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26913262	32114291	3917	0.0118
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	32114306	32114458	4	-1.7053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	32116505	41632708	4403	0.0077
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	41692297	41733631	6	-0.7425
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	41842529	42024172	12	0.615
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	42065266	44629223	111	-0.1421
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44727859	44781290	20	0.7858
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44781860	44805088	6	0.0918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44806415	44855737	10	0.9412
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	44866028	68831542	248	-0.0388
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	68837844	69092721	10	-0.6852
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	69098228	141091394	48177	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	72759	13050005	10941	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	13050023	13050170	4	-1.0378
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	13050428	27223903	10305	0.0086
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	27225904	27228473	13	-0.7681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	27229993	46070052	10257	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46072872	46088061	13	-0.5802
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46088963	46312487	46	0.0693
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46485761	46511281	4	1.1812
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	46527677	47055654	86	-0.1028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47055711	47059226	12	0.7342
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47059388	47897394	277	-0.0222
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47912899	47913401	2	-1.7886
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	47948060	67305111	12789	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	67306079	67314430	30	0.5025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	67314446	78252851	6805	0.01
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	78257061	78257610	2	1.887
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	78261267	89046064	7680	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	89046498	89069796	3	1.4976
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	89070745	135506704	31841	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	198510	4256129	1792	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4256300	4335878	24	-1.005
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4336067	4970243	664	-6e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4970277	4974029	23	-1.6148
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4975164	4976389	8	-0.6681
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	4976493	5787405	794	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	5788080	5809139	32	-0.5526
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	5809338	24442106	13853	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	24442174	24450257	7	-0.9464
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	24455176	49758987	16711	0.0085
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	49759555	49760056	5	-0.9442
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	49760688	55361431	752	0.03
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	55363340	55475560	74	0.3112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	55475639	118651809	40296	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118655114	118655450	2	-2.5914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118660135	133817472	11286	0.0106
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	133817656	133818097	2	1.398
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	133819442	134944770	840	0.0648
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	150442	7994787	5374	0.0165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	8004425	8123900	60	0.5165
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	8130958	11220827	1841	-0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11222368	11241532	10	-1.2672
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11251874	11511578	134	0.0216
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11512492	11543406	30	-0.6845
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	11552192	33294644	15430	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	33294660	33307374	28	-0.6432
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	33308360	45899825	5625	0.0135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	45904438	45909537	4	1.8601
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	45913292	132120247	55970	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	132120586	132133335	15	0.5538
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	132142331	133778189	572	0.0353
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	19026949	32532622	9647	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	32532727	32538423	17	-0.7049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	32540047	51545054	13048	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	51546911	51549198	2	1.9469
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	51549557	115108397	41607	0.0091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	19002124	19382344	25	0.0481
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	19402242	19422533	4	1.2136
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	19432799	41610496	13806	0.0134
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	41610690	41637429	10	-0.8524
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	41637815	74006707	20494	0.0084
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	74006851	74029900	8	1.1009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	74029915	88403376	9531	0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	88403394	88404241	10	0.7219
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	88404482	106460902	11255	0.0053
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106479675	106479941	2	-1.6967
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106482128	106535295	24	-0.1922
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106538062	106561441	13	-2.1042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106567100	106783044	103	-0.0694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106796025	106821736	11	1.3046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106825916	106868554	27	-0.0238
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106872062	106943834	63	-0.5044
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	106948568	107285437	214	-0.0098
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	20016328	20412026	64	0.0755
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	20412478	20646685	82	0.5758
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	20717386	20743794	4	-0.4608
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	20743947	22673399	272	0.6137
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	22681076	32489253	5850	0.0279
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	32504264	32512220	9	-0.9788
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	32531316	56789647	15295	0.0061
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	56790703	56800977	25	-0.475
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	56801623	76891241	12755	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	76891511	76892026	7	1.0785
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	76892041	76895775	14	0.5984
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	76902179	94162242	11501	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	94163349	94163373	2	1.5127
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	94163700	98117042	2957	0.0111
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	98117056	98121148	2	-1.6767
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	98129037	102469040	3229	0.0103
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	60777	32588622	20166	0.0181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	32588901	32588909	5	-3.4862
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	32609274	33097422	75	-0.1454
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	33101604	33631830	91	-0.3743
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	33643399	34459709	213	0.0088
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	34466571	34768247	176	0.5091
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	34768287	53458017	4574	0.009
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	53469387	53469463	2	-1.9264
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	53469807	55798779	2032	-0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	55804348	55821969	13	0.6135
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	55822397	90287535	25093	0.0125
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	526	18377278	11457	0.0144
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	18380394	18459272	16	-0.73
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	18464586	39421708	9507	0.0109
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	39423014	39430531	24	1.0786
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	39432724	48199585	4478	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	48200611	48204058	3	-1.4631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	48208274	70499516	14035	0.0073
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	70501141	70502158	2	-1.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	70502866	81049726	5789	0.0097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	11543	3054587	2146	0.0224
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3056688	3057729	4	-1.4792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3058407	38258727	20692	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	38260420	38265389	19	-0.562
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	38268024	63202976	17134	0.0021
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	63202995	63204717	15	0.7694
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	63207196	66743345	2592	0.0201
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	66746106	66758169	45	-0.6544
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	66758246	78015057	8175	0.0221
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	90910	5506659	1598	0.0031
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	5510239	5510653	3	-2.0062
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	5510700	59097854	27752	0.0067
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	61305	1590455	1244	0.0128
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	1590534	1593893	3	-1.3368
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	1597946	16662218	11760	0.0121
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	16662745	16667772	13	-0.8666
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	16669877	23496724	5311	0.003
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23496874	23498207	2	1.6199
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23498531	23551816	51	0.0503
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23552298	23552673	2	1.3829
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	23553340	25724407	1483	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25731638	25737116	4	-1.2761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25738625	62956153	22632	0.0063
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	10736871	10976162	59	-0.4652
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	10976682	28280513	9962	0.0094
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	28282660	28282852	3	-1.8269
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	28283604	44968053	12620	0.0108
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	44970873	44972812	2	-2.1495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	44973667	48096957	1766	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	16052528	24271745	4590	0.0059
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	24283016	24330218	26	-0.4319
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	24330269	24331967	2	-2.966
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	24332625	24344422	5	-0.4181
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	24350529	24396814	19	0.5159
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	24401529	42317111	12475	0.0045
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	42317925	42319656	2	-2.3022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	42323913	51234455	6446	0.0151
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	168477	116250468	61493	0.0071
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116252437	116252509	2	-3.6008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116252714	155182354	23042	0.0112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	Y	2650438	59018259	8634	-0.926
