Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	1	3218610	247813706	129114	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	2	484222	242476062	131236	0.0051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	2212571	41618779	23674	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	41619453	41622035	2	-1.8505
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	3	41622103	197538677	82676	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	4	1053934	188763651	102707	0.0047
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	5	914233	180360469	100480	0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	6	1014281	170903919	96455	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	705284	16803990	8204	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16806301	16808472	2	-1.6233
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	16811553	54016766	23467	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54016956	54019243	3	-1.4097
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	7	54019983	158385118	49614	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	8	617667	145232496	81518	0.0042
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	789932	17400622	9975	0.0039
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	17406022	17406381	3	-1.1706
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	17407202	26910547	6452	1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26910951	26912473	2	-2.2534
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	9	26913262	140938752	51585	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	10	415240	135225087	80848	0.004
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	456120	92623122	49909	0.0025
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	92623478	92623493	2	-1.6632
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	92623608	118651809	16703	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118655114	118655450	2	-2.5914
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	11	118660135	134142530	10618	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	12	889902	133161346	73926	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	13	19450806	114987458	56629	0.0041
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	14	20501368	105988038	49432	0.0046
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	15	23687685	101884307	44515	0.0032
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	16	653459	89379936	40786	0.0056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	987221	30289677	11808	0.0055
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	30289897	30298854	3	-1.3726
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	30306471	48199585	7761	-9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	48200611	48204058	3	-1.4631
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	48208274	70499516	13053	0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	70501141	70502158	2	-1.9745
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	17	70502866	80917016	4354	3e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	329586	3054587	1012	0.0081
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3056688	3057729	4	-1.4792
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	18	3058407	77109240	41629	0.0017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	19	284018	58878226	23941	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	455764	25724407	16692	0.0022
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25731638	25737116	4	-1.2761
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	20	25738625	62219837	20582	0.0052
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	21	15347621	47678774	20579	0.0049
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	22	17423930	49331012	16921	0.0054
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	3157107	116250468	46184	0.0072
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116252437	116252509	2	-3.6008
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A08_896492	X	116252714	154905589	17548	0.0106
