Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	3208470	245633498	128757	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	245634546	245634555	2	-2.7657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	245634674	245880329	159	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	474222	182761903	97809	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	182763240	182767445	5	-1.1232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	182774179	242124735	33330	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	3	526235	199023074	106256	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	1043934	107719713	58784	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	107719751	107720288	2	-1.8945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	107722658	189836143	43860	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	967233	28345474	16199	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	28345542	28345711	2	-1.7056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	28352414	34893227	3692	-0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	34895094	34895197	3	-1.4643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	34896381	174678035	78044	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	174680101	174683211	5	-0.9258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	174683762	177372169	949	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	177410330	177413869	2	-1.306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	177415125	180293075	1489	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	6	959281	170745844	96370	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	671810	75275621	38112	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	75276699	75276716	2	-2.0753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	75277632	125454233	25853	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	125454450	125454514	2	-1.5051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	125454836	158077879	17271	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	8	607667	145304484	81430	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	9	779932	140058573	67945	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	405240	2173914	854	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	2174223	2174599	2	-2.3112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	2174888	135075077	79915	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	446120	130871348	75487	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	130871945	130874910	2	-1.8495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	130876201	133647740	1664	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	12	760163	131671419	73884	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	13	18348806	114005560	56574	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	14	19571208	105059083	49400	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	15	21238778	99701830	44474	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	16	593460	87907437	40824	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	17	933971	78510305	36946	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	18	319586	75210228	42610	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	19	235018	63570038	23925	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	403764	29628788	16971	0.0036
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	29631342	29632401	3	-1.3918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	29632913	61690281	20265	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	14269492	34213796	12651	0.0029
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	34218306	34352704	112	0.527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	34352786	46503202	7804	-0.0034
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	22	15803930	47717016	16901	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	3167107	73808463	28403	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	73812032	73819920	9	-0.9373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	73821416	154558783	35334	0.0035
