Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	3218610	247566875	128812	0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	247567923	247567932	2	-2.7657
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	1	247568051	247813706	159	-0.0207
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	484222	183053658	97798	0.0033
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	183054995	183059200	5	-1.1232
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	2	183065934	242476062	33333	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	3	2212571	197538677	106250	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	1053934	107500264	58785	0.001
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	107500302	107500839	2	-1.8945
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	4	107503209	188763651	43864	-4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	914233	28309717	16201	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	28309785	28309954	2	-1.7056
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	28316657	34857470	3692	-0.0043
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	34859337	34859440	3	-1.4643
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	34860624	174745429	78042	-0.0018
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	174747495	174750605	5	-0.9258
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	174751156	177439563	949	0.017
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	177477724	177481263	2	-1.306
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	5	177482519	180360469	1489	0.0123
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	6	1014281	170903919	96379	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	705284	75437685	38112	-0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	75438763	75438780	2	-2.0753
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	75439696	125666997	25856	-0.0011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	125667214	125667278	2	-1.5051
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	7	125667600	158385118	17269	0.0012
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	8	617667	145232496	81437	-0.0024
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	9	789932	140938752	67957	0.0013
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	415240	2183914	854	0.0068
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	2184223	2184599	2	-2.3112
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	10	2184888	135225087	79913	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	456120	131366138	75477	9e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	131366735	131369700	2	-1.8495
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	11	131370991	134142530	1664	-0.011
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	12	889902	133161346	73879	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	13	19450806	114987458	56570	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	14	20501368	105988038	49398	2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	15	23687685	101884307	44472	-8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	16	653459	89379936	40759	8e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	17	987221	80917016	36946	0.002
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	18	329586	77109240	42607	-0.0014
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	19	284018	58878226	23925	0.0064
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	455764	30165127	16974	0.0037
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	30167681	30168740	3	-1.3918
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	20	30169252	62219837	20265	-1e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	15347621	35291926	12652	0.0028
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	35296436	35430834	112	0.527
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	21	35430916	47678774	7802	-0.0035
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	22	17423930	49331012	16900	4e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	3157107	73891738	28414	-2e-04
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	73895307	73903195	9	-0.9373
LIGER_p_TCGA_166_180_SNP_N_GenomeWideSNP_6_A09_896468	X	73904691	154905589	35340	0.0035
